Mir683-2 Gene Detail

Summary

• Symbol
  Mir683-2
• Name
  microRNA 683-2
• Synonyms
  Gm23091, Mirn683-2, Mirn683b, mmu-mir-683, mmu-mir-683-2

• Feature Type
  miRNA gene
• IDs
  MGI:3719634
  NCBI Gene: 100124649
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50755008-50755116 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 25.81 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3719634	miRNA gene	Chr13:50755008-50755116 (-)
129S1/SvImJ	ENSMUSG00200036664	miRNA gene	Chr13:47883978-47884086 (-)
A/J	ENSMUSG00195030649	miRNA gene	Chr13:46693586-46693694 (+)
AKR/J	ENSMUSG00220009937	miRNA gene	Chr13:46527382-46527490 (+)
BALB/cJ	ENSMUSG00180009118	miRNA gene	Chr13:47335358-47335466 (-)
C3H/HeJ	ENSMUSG00175030217	miRNA gene	Chr13:46783012-46783120 (+)
C57BL/6NJ	ENSMUSG00215006716	miRNA gene	Chr13:46893596-46893704 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033164	miRNA gene	Chr13:47100650-47100758 (+)
CBA/J	ENSMUSG00210028727	miRNA gene	Chr13:47327621-47327729 (-)
DBA/2J	ENSMUSG00185031890	miRNA gene	Chr13:48176536-48176644 (-)
FVB/NJ	ENSMUSG00205012705	miRNA gene	Chr13:47091265-47091373 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230029368	miRNA gene	Chr13:57497275-57497383 (-)
NOD/ShiLtJ	ENSMUSG00190012446	miRNA gene	Chr13:47202529-47202536 (-)
NZO/HlLtJ	ENSMUSG00225035444	miRNA gene	Chr13:51247713-51247821 (-)
PWK/PhJ	ENSLUMG00010022656	miRNA gene	Chr13:46465088-46465196 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mir683-2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir683-2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000119667 (Evidence)
• NCBI Gene
  100124649

Representative Sequences			Length	Strain/Species
genomic	100124649	NCBI Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	NR_030647	RefSeq | MGI Sequence Detail	109	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0010690

Other
Accession IDs

MGI:5452868

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582