9930111J21Rik2 Gene Detail

Summary

• Symbol
  9930111J21Rik2
• Name
  RIKEN cDNA 9930111J21 gene 2

• Feature Type
  protein coding gene
• IDs
  MGI:3711310
  NCBI Gene: 245240
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:48928487-48942069 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 29.01 cM

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3711310	protein coding gene	Chr11:48906701-48942069 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195034004	protein coding gene	Chr11:45833907-45870304 (-)
AKR/J	ENSMUSG00220034546	protein coding gene	Chr11:46039413-46075814 (-)
BALB/cJ	ENSMUSG00180032511	protein coding gene	Chr11:45896432-45931824 (-)
C3H/HeJ	ENSMUSG00175030441	protein coding gene	Chr11:45865655-45902044 (-)
C57BL/6NJ	ENSMUSG00215026026	protein coding gene	Chr11:45792537-45828896 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185026563	protein coding gene	Chr11:45976773-46012151 (-)
FVB/NJ	ENSMUSG00205021876	protein coding gene	Chr11:45850784-45887171 (-)
JF1/MsJ	ENSUMUG00000033283	protein coding gene	Chr11:46220681-46256075 (-)
LP/J	ENSMUSG00230032330	protein coding gene	Chr11:47115986-47151362 (-)
LP/J	ENSMUSG00230032100	protein coding gene	Chr11:47046259-47079505 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225035013	protein coding gene	Chr11:49095625-49131006 (-)
NZO/HlLtJ	ENSMUSG00225034945	protein coding gene	Chr11:49025803-49059059 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  9930111J21Rik2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 9930111J21Rik2
• Find Mice (IMSR)
  18 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  12
• UniProt
  2
• CCDS
  CCDS36144.1

• Ensembl
  ENSMUSG00000069892 (Evidence)
• NCBI Gene
  245240

Representative Sequences			Length	Strain/Species
genomic	245240	NCBI Gene Model | MGI Sequence Detail	13583	C57BL/6J
transcript	NM_001436166	RefSeq | MGI Sequence Detail	7886	C57BL/6
polypeptide	NP_001423095	RefSeq | MGI Sequence Detail	844	C57BL/6

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 14

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:144154 Bekpen C, et al., The interferon-inducible p47 (IRG) GTPases in vertebrates: loss of the cell autonomous resistance mechanism in the human lineage. Genome Biol. 2005;6(11):R92