Gpr137b-ps Pseudogene Detail

Summary

• Symbol
  Gpr137b-ps
• Name
  G protein-coupled receptor 137B, pseudogene
• Synonyms
  ENSMUSG00000075118

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3710533
  NCBI Gene: 664862
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr13:12628954-12665284 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 5.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  625 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3710533	pseudogene	Chr13:12628945-12684621 (-)
129S1/SvImJ	ENSMUSG00200006828	pseudogene	Chr13:9880548-9915529 (-)
129S1/SvImJ	ENSMUSG00200014302	pseudogene	Chr13:10785419-10801796 (-)
A/J	ENSMUSG00195013675	pseudogene	Chr13:9815347-9850355 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180038730	pseudogene	Chr13:10164439-10199442 (-)
C3H/HeJ	ENSMUSG00175036147	pseudogene	Chr13:10273414-10308423 (-)
C57BL/6NJ	ENSMUSG00215021686	pseudogene	Chr13:9936301-9971642 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004926	lincRNA gene	Chr13:9037243-9068052 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210023156	pseudogene	Chr13:9194126-9229471 (-)
DBA/2J	ENSMUSG00185024930	pseudogene	Chr13:9883246-9918587 (-)
FVB/NJ	ENSMUSG00205029385	pseudogene	Chr13:9672663-9708005 (-)
JF1/MsJ	ENSUMUG00000008963	pseudogene	Chr13:9922546-9957931 (-)
LP/J	ENSMUSG00230007812	pseudogene	Chr13:19370592-19405924 (-)
NOD/ShiLtJ	ENSMUSG00190013206	pseudogene	Chr13:9332037-9367381 (-)
NZO/HlLtJ	ENSMUSG00225032756	pseudogene	Chr13:13265472-13300814 (-)
PWK/PhJ	ENSLUMG00010017751	pseudogene	Chr13:9278840-9314093 (-)
SPRET/EiJ	ENSMSPG00010024235	pseudogene	Chr13:9302662-9337909 (-)
WSB/EiJ	ENSIUOG00005022970	pseudogene	Chr13:9122689-9157688 (-)

Expression

• cDNA Data
  6

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  79
• RefSeq
  1

• Ensembl
  ENSMUSG00000097715 (Evidence), ENSMUSG00000121485 (Evidence)
• NCBI Gene
  664862

Representative Sequences			Length	Strain/Species
genomic	664862	NCBI Gene Model | MGI Sequence Detail	36331	C57BL/6J
transcript	NR_003568	RefSeq | MGI Sequence Detail	2956	C57BL/6

Molecular
Reagents

• All nucleic 7

  cDNA 7

  
  

  Microarray probesets 8

References

• Summaries
  All 13
• Earliest
  J:68961 Spangenberg C, et al., Cloning and characterization of a novel gene (TM7SF1) encoding a putative seven-pass transmembrane protein that is upregulated during kidney development. Genomics. 1998 Mar 1;48(2):178-85
• Latest
  J:363477 Qu W, et al., Long Noncoding RNA Gpr137b-ps Promotes Advanced Atherosclerosis via the Regulation of Autophagy in Macrophages. Arterioscler Thromb Vasc Biol. 2023 Nov;43(11):e468-e489

TSS for Gpr137b-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr121468	Chr13:12665207-12665246 (-)	57 bp
Tssr121467	Chr13:12665072-12665111 (-)	192 bp
Tssr121466	Chr13:12630971-12630974 (-)	34,311 bp