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H2al1d Gene Detail
Summary
  • Symbol
    H2al1d
  • Name
    H2A histone family member L1D
  • Synonyms
    ENSMUSG00000073284, Gm14476
Location &
Maps
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  • Sequence Map
    ChrX:11175063-11175380 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 6.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
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  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3710419
 protein coding gene ChrX:11175063-11175380 (+)
129S1/SvImJ ENSMUSG00200033965
 protein coding gene ChrX:5934117-5934625 (+)
A/J ENSMUSG00195039414
 protein coding gene ChrX:5903188-5903505 (+)
AKR/J ENSMUSG00220034056
 protein coding gene ChrX:5434374-5434691 (+)
BALB/cJ no annotation
C3H/HeJ ENSMUSG00175031144
 protein coding gene ChrX:5924770-5925087 (+)
C3H/HeJ ENSMUSG00175032550
 protein coding gene ChrX:5931104-5931421 (+)
C57BL/6NJ ENSMUSG00215038209
 protein coding gene ChrX:6565908-6566225 (+)
C57BL/6NJ ENSMUSG00215038630
 protein coding gene ChrX:6569075-6569392 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210035537
 protein coding gene ChrX:5970870-5971187 (+)
CBA/J ENSMUSG00210033944
 protein coding gene ChrX:5977204-5977521 (+)
CBA/J ENSMUSG00210034769
 protein coding gene ChrX:5980371-5980688 (+)
DBA/2J no annotation
FVB/NJ ENSMUSG00205028386
 protein coding gene ChrX:5641438-5641755 (+)
FVB/NJ ENSMUSG00205029106
 protein coding gene ChrX:5644607-5644924 (+)
JF1/MsJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ ENSMUSG00225033357
 protein coding gene ChrX:22339729-22340046 (+)
NZO/HlLtJ ENSMUSG00225033134
 protein coding gene ChrX:22358733-22359050 (+)
NZO/HlLtJ ENSMUSG00225033084
 protein coding gene ChrX:22352399-22352716 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
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  • Human Ortholog
    H2AL3, H2A.L variant histone 3
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H2AL3, H2A.L variant histone 3
  • Synonyms
    H2AL1RP, H2A.L.3
  • Links
    NCBI Gene ID: 115482686
    UniProt: A0A3B3IU63

  • Chr Location
    chrX:37994272-37994904 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 100042931 NCBI Gene Model | MGI Sequence Detail 318 C57BL/6J ±  kb
transcript NM_001242950 RefSeq | MGI Sequence Detail 318 C57BL/6  
polypeptide Q5M8Q2 UniProt | EBI | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
Protein
Information
less
References
more
  • Summaries
    All 9
  • Earliest
    J:119495 Govin J, et al., Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis. J Cell Biol. 2007 Jan 29;176(3):283-94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory