Gm10481 Pseudogene Detail

Summary

• Symbol
  Gm10481
• Name
  predicted gene 10481
• Synonyms
  EG433845

• Feature Type
  pseudogene
• IDs
  MGI:3708707
  NCBI Gene: 433845
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:13092400-13093401 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.97 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708707	pseudogene	Chr5:13092209-13093419 (-)
129S1/SvImJ	ENSMUSG00200003322	pseudogene	Chr5:9398496-9399497 (-)
A/J	ENSMUSG00195012318	pseudogene	Chr5:8969470-8970471 (-)
AKR/J	ENSMUSG00220002139	pseudogene	Chr5:9060150-9061151 (-)
BALB/cJ	ENSMUSG00180017343	pseudogene	Chr5:8763739-8764740 (-)
C3H/HeJ	ENSMUSG00175028464	pseudogene	Chr5:8641411-8642412 (-)
C57BL/6NJ	ENSMUSG00215025221	pseudogene	Chr5:9451770-9452771 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001878	pseudogene	Chr5:8978425-8978473 (-)
CBA/J	ENSMUSG00210002806	pseudogene	Chr5:9514492-9515493 (-)
DBA/2J	ENSMUSG00185017889	pseudogene	Chr5:10112589-10113590 (-)
FVB/NJ	ENSMUSG00205009019	pseudogene	Chr5:8695338-8696339 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230003690	pseudogene	Chr5:14077008-14078009 (-)
NOD/ShiLtJ	ENSMUSG00190013143	pseudogene	Chr5:9006115-9007116 (-)
NZO/HlLtJ	ENSMUSG00225009320	pseudogene	Chr5:17772501-17773502 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027433	pseudogene	Chr5:9112932-9113933 (-)

Homology

• Gene Tree
  Gm10481
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000096810 (Evidence)
• NCBI Gene
  433845

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096810	Ensembl Gene Model | MGI Sequence Detail	1002	C57BL/6J
transcript	ENSMUST00000179228	Ensembl | MGI Sequence Detail	1002	Not Applicable
polypeptide	Q3TUZ9	UniProt | EBI | MGI Sequence Detail	144	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• EC
  1.2.1.12
• InterPro Domains
  IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
  IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:3643165

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;