Ctdsp2-ps Pseudogene Detail

Summary

• Symbol
  Ctdsp2-ps
• Name
  CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, pseudogene
• Synonyms
  Gm9770

• Feature Type
  pseudogene
• IDs
  MGI:3708545
  NCBI Gene: 100043719
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:130248368-130249178 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 77.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3708545	pseudogene	Chr10:130248116-130250002 (+)
129S1/SvImJ	ENSMUSG00200013849	pseudogene	Chr10:126607302-126608112 (+)
A/J	ENSMUSG00195017065	pseudogene	Chr10:127076469-127077279 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180011896	pseudogene	Chr10:127061451-127062261 (+)
C3H/HeJ	ENSMUSG00175006303	pseudogene	Chr10:127050794-127051604 (+)
C57BL/6NJ	ENSMUSG00215019896	pseudogene	Chr10:126667582-126668392 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0033986	pseudogene	Chr10:119348004-119364621 (+)
CAST/EiJ	ENSTCUG00005041531	pseudogene	Chr10:126028114-126029307 (+)
CBA/J	ENSMUSG00210009497	pseudogene	Chr10:126875095-126875905 (+)
DBA/2J	ENSMUSG00185027865	pseudogene	Chr10:127034488-127035298 (+)
FVB/NJ	ENSMUSG00205026782	pseudogene	Chr10:126278666-126279476 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230034253	pseudogene	Chr10:128968728-128969538 (+)
NOD/ShiLtJ	ENSMUSG00190016590	pseudogene	Chr10:127092462-127093272 (+)
NZO/HlLtJ	ENSMUSG00225013296	pseudogene	Chr10:133159112-133159922 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005009275	pseudogene	Chr10:126681133-126681943 (+)

Homology

• Gene Tree
  Ctdsp2-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000040540 (Evidence)
• NCBI Gene
  100043719

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000040540	Ensembl Gene Model | MGI Sequence Detail	811	C57BL/6J
transcript	ENSMUST00000075147	Ensembl | MGI Sequence Detail	811	Not Applicable

Other
Accession IDs

MGI:6363024

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;