Gm15368 Pseudogene Detail

Summary

• Symbol
  Gm15368
• Name
  predicted gene 15368

• Feature Type
  pseudogene
• IDs
  MGI:3707462
  NCBI Gene: 100418108
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr1:88114393-88115241 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 44.54 cM

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3707462	pseudogene	Chr1:88114384-88115241 (+)
129S1/SvImJ	ENSMUSG00200039089	pseudogene	Chr1:85356075-85356932 (+)
A/J	ENSMUSG00195032989	pseudogene	Chr1:84916834-84917691 (+)
AKR/J	ENSMUSG00220045308	pseudogene	Chr1:85064771-85065628 (+)
BALB/cJ	ENSMUSG00180017397	pseudogene	Chr1:85203623-85204480 (+)
C3H/HeJ	ENSMUSG00175001553	pseudogene	Chr1:85082537-85083394 (+)
C57BL/6NJ	ENSMUSG00215038167	pseudogene	Chr1:85005253-85006110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037034	pseudogene	Chr1:80676411-80677268 (+)
CAST/EiJ	ENSTCUG00005007914	pseudogene	Chr1:84659947-84660804 (+)
CBA/J	ENSMUSG00210012505	pseudogene	Chr1:84927836-84928693 (+)
DBA/2J	ENSMUSG00185016969	pseudogene	Chr1:89401138-89401995 (+)
FVB/NJ	ENSMUSG00205041383	pseudogene	Chr1:84350567-84351424 (+)
JF1/MsJ	ENSUMUG00000020383	pseudogene	Chr1:88164094-88164951 (+)
LP/J	ENSMUSG00230020751	pseudogene	Chr1:88692386-88693243 (+)
NOD/ShiLtJ	ENSMUSG00190036760	pseudogene	Chr1:84991430-84992287 (+)
NZO/HlLtJ	ENSMUSG00225004056	pseudogene	Chr1:92588569-92589426 (+)
PWK/PhJ	ENSLUMG00010048748	pseudogene	Chr1:84557586-84558443 (+)
SPRET/EiJ	ENSMSPG00010048310	pseudogene	Chr1:86585700-86586535 (+)
WSB/EiJ	ENSIUOG00005044388	pseudogene	Chr1:84584465-84585322 (+)

Homology

• Gene Tree
  Gm15368
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15368
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000081488 (Evidence)
• NCBI Gene
  100418108

Representative Sequences			Length	Strain/Species
genomic	100418108	NCBI Gene Model | MGI Sequence Detail	849	C57BL/6J

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15368:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7947	Chr1:88114309-88114312 (+)	-82 bp
Tssr7948	Chr1:88114324-88114341 (+)	-60 bp
Tssr7949	Chr1:88114348-88114359 (+)	-39 bp