Gm15038 Pseudogene Detail

Summary

• Symbol
  Gm15038
• Name
  predicted gene 15038

• Feature Type
  pseudogene
• IDs
  MGI:3705689
  NCBI Gene: 108168451
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:135898791-135899086 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 59.10 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705689	pseudogene	ChrX:135897290-135904555 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0039774	pseudogene	ChrX:133824676-133824971 (+)
AKR/J	MGP_AKRJ_G0039701	pseudogene	ChrX:138112278-138112573 (+)
BALB/cJ	MGP_BALBcJ_G0039746	pseudogene	ChrX:132236211-132236506 (+)
C3H/HeJ	MGP_C3HHeJ_G0039403	pseudogene	ChrX:134501523-134501818 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040305	pseudogene	ChrX:138345991-138346286 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036929	pseudogene	ChrX:125748213-125748510 (+)
CAST/EiJ	MGP_CASTEiJ_G0038521	pseudogene	ChrX:115249324-115249619 (+)
CBA/J	MGP_CBAJ_G0039376	pseudogene	ChrX:142589523-142589818 (+)
DBA/2J	MGP_DBA2J_G0039571	pseudogene	ChrX:133115095-133115390 (+)
FVB/NJ	MGP_FVBNJ_G0039530	pseudogene	ChrX:132324492-132324787 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039532	pseudogene	ChrX:149889763-149890058 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040412	pseudogene	ChrX:133791854-133792149 (+)
PWK/PhJ	MGP_PWKPhJ_G0038199	pseudogene	ChrX:112267297-112267592 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037943	pseudogene	ChrX:115852115-115852409 (+)
WSB/EiJ	MGP_WSBEiJ_G0038754	pseudogene	ChrX:132123943-132124238 (+)

Homology

• Gene Tree
  Gm15038
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083445 (Evidence)
• NCBI Gene
  108168451

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083445	Ensembl Gene Model | MGI Sequence Detail	296	C57BL/6J
transcript	ENSMUST00000122144	Ensembl | MGI Sequence Detail	296	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;