H2al1r-ps Pseudogene Detail

Summary

• Symbol
  H2al1r-ps
• Name
  H2A histone family member L1R, pseudogene
• Synonyms
  Gm14674

• Feature Type
  pseudogene
• IDs
  MGI:3705677
  NCBI Gene: 100503851
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:65069155-65069496 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 34.69 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705677	pseudogene	ChrX:65069107-65069615 (+)
129S1/SvImJ	ENSMUSG00200016352	pseudogene	ChrX:47204370-47204711 (+)
A/J	ENSMUSG00195009646	pseudogene	ChrX:50851127-50851468 (+)
AKR/J	ENSMUSG00220024513	pseudogene	ChrX:46189581-46189922 (+)
BALB/cJ	ENSMUSG00180006811	pseudogene	ChrX:47465756-47466097 (+)
C3H/HeJ	ENSMUSG00175009407	pseudogene	ChrX:51029720-51030061 (+)
C57BL/6NJ	ENSMUSG00215008762	pseudogene	ChrX:47447410-47447751 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020009	pseudogene	ChrX:49114818-49115156 (+)
CBA/J	ENSMUSG00210018655	pseudogene	ChrX:47641108-47641449 (+)
DBA/2J	ENSMUSG00185034991	pseudogene	ChrX:60108923-60109264 (+)
FVB/NJ	ENSMUSG00205009321	pseudogene	ChrX:47224246-47224587 (+)
JF1/MsJ	ENSUMUG00000046433	pseudogene	ChrX:80965364-80965709 (+)
LP/J	ENSMUSG00230019031	pseudogene	ChrX:66672052-66672393 (+)
NOD/ShiLtJ	ENSMUSG00190013201	pseudogene	ChrX:46973607-46973948 (+)
NZO/HlLtJ	ENSMUSG00225049018	pseudogene	ChrX:71915985-71916326 (+)
PWK/PhJ	ENSLUMG00010027305	pseudogene	ChrX:46866363-46866708 (+)
SPRET/EiJ	ENSMSPG00010004662	pseudogene	ChrX:49757645-49757927 (+)
WSB/EiJ	ENSIUOG00005012303	pseudogene	ChrX:47966564-47966905 (+)

Homology

• Gene Tree
  H2al1r-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082863 (Evidence)
• NCBI Gene
  100503851

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082863	Ensembl Gene Model | MGI Sequence Detail	342	C57BL/6J
transcript	ENSMUST00000117816	Ensembl | MGI Sequence Detail	342	Not Applicable

Other
Accession IDs

MGI:7286036

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for H2al1r-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr161126	ChrX:65069091-65069102 (+)	-58 bp