Gm14678 Pseudogene Detail

Summary

• Symbol
  Gm14678
• Name
  predicted gene 14678

• Feature Type
  pseudogene
• IDs
  MGI:3705614
  NCBI Gene: 100418346
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:61690331-61690812 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 34.57 cM

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705614	pseudogene	ChrX:61689637-61690812 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014468	pseudogene	ChrX:58076306-58076786 (+)
A/J	MGP_AJ_G0014478	pseudogene	ChrX:58291789-58292270 (+)
AKR/J	MGP_AKRJ_G0013944	pseudogene	Chr7:118018949-118019430 (-)
BALB/cJ	MGP_BALBcJ_G0014434	pseudogene	ChrX:57574562-57575043 (+)
C3H/HeJ	MGP_C3HHeJ_G0014230	pseudogene	ChrX:51864275-51864757 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014855	pseudogene	ChrX:52695300-52695781 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012675	pseudogene	ChrX:57918139-57918624 (+)
CAST/EiJ	MGP_CASTEiJ_G0013902	pseudogene	ChrX:44325188-44325669 (+)
CBA/J	MGP_CBAJ_G0014251	pseudogene	ChrX:61463121-61463608 (+)
DBA/2J	MGP_DBA2J_G0014334	pseudogene	ChrX:57853614-57854101 (+)
FVB/NJ	MGP_FVBNJ_G0014326	pseudogene	ChrX:57347871-57349034 (+)
LP/J	MGP_LPJ_G0014426	pseudogene	ChrX:58721248-58721728 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014362	pseudogene	ChrX:63171093-63171574 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014871	pseudogene	ChrX:58091374-58091855 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013477	pseudogene	ChrX:37572237-37572720 (-)
WSB/EiJ	MGP_WSBEiJ_G0013975	pseudogene	ChrX:57513195-57513764 (+)

Homology

• Gene Tree
  Gm14678
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081001 (Evidence)
• NCBI Gene
  100418346

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081001	Ensembl Gene Model | MGI Sequence Detail	482	C57BL/6J
transcript	ENSMUST00000121396	Ensembl | MGI Sequence Detail	482	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;