Gm15365 Pseudogene Detail

Summary

• Symbol
  Gm15365
• Name
  predicted gene 15365
• Synonyms
  EG546321

• Feature Type
  pseudogene
• IDs
  MGI:3705398
  NCBI Gene: 546321
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:73757108-73757407 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  16 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705398	pseudogene	ChrX:73757108-73757407 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011424	pseudogene	Chr18:18961596-18961895 (+)
A/J	MGP_AJ_G0011419	pseudogene	Chr18:18445737-18446036 (+)
AKR/J	MGP_AKRJ_G0011382	pseudogene	Chr18:19012157-19012456 (+)
BALB/cJ	MGP_BALBcJ_G0011397	pseudogene	Chr18:18499950-18500249 (+)
C3H/HeJ	MGP_C3HHeJ_G0011285	pseudogene	Chr18:18947993-18948292 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0012735	pseudogene	ChrX:80863603-80863900 (-)
CAST/EiJ	MGP_CASTEiJ_G0013990	pseudogene	ChrX:67139486-67139785 (-)
CBA/J	MGP_CBAJ_G0011261	pseudogene	Chr18:20361984-20362291 (+)
DBA/2J	MGP_DBA2J_G0011314	pseudogene	Chr18:18148671-18148978 (+)
FVB/NJ	MGP_FVBNJ_G0011319	pseudogene	Chr18:17926435-17926742 (+)
LP/J	MGP_LPJ_G0011384	pseudogene	Chr18:19107877-19108176 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011311	pseudogene	Chr18:21240573-21240880 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014921	pseudogene	ChrX:70349330-70349672 (-)
PWK/PhJ	MGP_PWKPhJ_G0013796	pseudogene	ChrX:65170465-65170761 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013595	pseudogene	ChrX:68069301-68069600 (-)
WSB/EiJ	MGP_WSBEiJ_G0011124	pseudogene	Chr18:18699862-18700169 (+)

Homology

• Gene Tree
  Gm15365
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000080777 (Evidence)
• NCBI Gene
  546321

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080777	Ensembl Gene Model | MGI Sequence Detail	300	C57BL/6J
transcript	ENSMUST00000122392	Ensembl | MGI Sequence Detail	300	Not Applicable

Other
Accession IDs

MGI:3645572

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;