Gm15186 Pseudogene Detail

Summary

• Symbol
  Gm15186
• Name
  predicted gene 15186

• Feature Type
  pseudogene
• IDs
  MGI:3705337
  NCBI Gene: 100416958
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:158371461-158372023 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 73.61 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705337	pseudogene	ChrX:158371318-158372066 (+)
129S1/SvImJ	ENSMUSG00200027393	pseudogene	ChrX:135093253-135093815 (+)
A/J	ENSMUSG00195038480	pseudogene	ChrX:140216555-140217117 (+)
AKR/J	ENSMUSG00220033052	pseudogene	ChrX:132072624-132073186 (+)
BALB/cJ	ENSMUSG00180041241	pseudogene	ChrX:135583127-135583688 (+)
C3H/HeJ	ENSMUSG00175026810	pseudogene	ChrX:140154345-140154907 (+)
C57BL/6NJ	ENSMUSG00215025451	pseudogene	ChrX:135986599-135987162 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013028	pseudogene	ChrX:148034350-148034920 (+)
CAST/EiJ	ENSTCUG00005034684	pseudogene	ChrX:137765517-137766078 (+)
CBA/J	ENSMUSG00210039932	pseudogene	ChrX:137476837-137477399 (+)
DBA/2J	ENSMUSG00185045902	pseudogene	ChrX:152422789-152423351 (+)
FVB/NJ	ENSMUSG00205034486	pseudogene	ChrX:136092475-136093037 (+)
JF1/MsJ	ENSUMUG00000037173	pseudogene	ChrX:172845110-172845672 (+)
LP/J	ENSMUSG00230014690	pseudogene	ChrX:159212698-159213260 (+)
NOD/ShiLtJ	ENSMUSG00190035599	pseudogene	ChrX:136561931-136562493 (+)
NZO/HlLtJ	ENSMUSG00225042226	pseudogene	ChrX:162601927-162602489 (+)
PWK/PhJ	ENSLUMG00010042603	pseudogene	ChrX:133937702-133938263 (+)
SPRET/EiJ	ENSMSPG00010020177	pseudogene	ChrX:139011138-139011712 (+)
WSB/EiJ	ENSIUOG00005025931	pseudogene	ChrX:136900182-136900744 (+)

Homology

• Gene Tree
  Gm15186
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm15186
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083906 (Evidence)
• NCBI Gene
  100416958

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083906	Ensembl Gene Model | MGI Sequence Detail	563	C57BL/6J
transcript	ENSMUST00000119345	Ensembl | MGI Sequence Detail	563	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:46359 Blair HJ, et al., Mouse mutants carrying deletions that remove the genes mutated in Coffin-Lowry syndrome and lactic acidosis. Hum Mol Genet. 1998 Mar;7(3):549-55

TSS for Gm15186:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr162497	ChrX:158371311-158371348 (+)	-131 bp