Gm15050 MGI Mouse Gene Detail - MGI:3705180

Sequence Map

Chr6:52149861-52151039 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705180	lncRNA gene	Chr6:52149861-52151039 (+)
129S1/SvImJ	ENSMUSG00200005729	lncRNA gene	Chr6:49127176-49128341 (+)
A/J	ENSMUSG00195006928	lncRNA gene	Chr6:48851103-48852270 (+)
AKR/J	ENSMUSG00220004133	lncRNA gene	Chr6:48560165-48561333 (+)
BALB/cJ	ENSMUSG00180024022	lncRNA gene	Chr6:49152816-49153985 (+)
C3H/HeJ	ENSMUSG00175017691	lncRNA gene	Chr6:48919384-48920561 (+)
C57BL/6NJ	ENSMUSG00215012025	lncRNA gene	Chr6:49103631-49104812 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003857	antisense lncRNA gene	Chr6:46656480-46657659 (+)
CAST/EiJ	ENSTCUG00005005127	lncRNA gene	Chr6:48409737-48410913 (+)
CBA/J	ENSMUSG00210018428	lncRNA gene	Chr6:48963682-48964861 (+)
DBA/2J	ENSMUSG00185014941	lncRNA gene	Chr6:49545928-49547097 (+)
FVB/NJ	ENSMUSG00205029916	lncRNA gene	Chr6:49204055-49205220 (+)
JF1/MsJ	ENSUMUG00000016171	lncRNA gene	Chr6:48918612-48919795 (+)
LP/J	ENSMUSG00230019829	lncRNA gene	Chr6:50624479-50625642 (+)
NOD/ShiLtJ	ENSMUSG00190038549	lncRNA gene	Chr6:48881072-48882248 (+)
NZO/HlLtJ	ENSMUSG00225013863	lncRNA gene	Chr6:52608467-52609630 (+)
PWK/PhJ	ENSLUMG00010021439	lncRNA gene	Chr6:48655601-48656796 (+)
SPRET/EiJ	ENSMSPG00010010352	lncRNA gene	Chr6:49239601-49240776 (+)
WSB/EiJ	ENSIUOG00005028262	lncRNA gene	Chr6:49226522-49227703 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100504154	NCBI Gene Model \| MGI Sequence Detail	1179	C57BL/6J	± kb
	transcript	NR_152256	RefSeq \| MGI Sequence Detail	552	ZRU/MplStud

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Summaries

All 21

Phenotypes 10
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Latest

J:207500 Berlivet S, et al., Clustering of tissue-specific sub-TADs accompanies the regulation of HoxA genes in developing limbs. PLoS Genet. 2013 Dec;9(12):e1004018

TSS for Gm15050:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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