Gm11906 Gene Detail

Summary

• Symbol
  Gm11906
• Name
  predicted gene 11906

• Feature Type
  lncRNA gene
• IDs
  MGI:3705114
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr4:24966517-25271099 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 10.53 cM

Strain
Comparison

• SNPs within 2kb
  8860 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3705114	lncRNA gene	Chr4:24966517-25271099 (+)
129S1/SvImJ	ENSMUSG00200012852	lncRNA gene	Chr4:21679989-21942810 (+)
A/J	ENSMUSG00195000260	lncRNA gene	Chr4:22154365-22466488 (+)
AKR/J	ENSMUSG00220014784	lncRNA gene	Chr4:21904247-22230796 (+)
BALB/cJ	ENSMUSG00180000351	lncRNA gene	Chr4:21626428-21978286 (+)
C3H/HeJ	ENSMUSG00175002385	lncRNA gene	Chr4:22134170-22438707 (+)
C57BL/6NJ	ENSMUSG00215000855	lncRNA gene	Chr4:21751533-22056135 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013665	unclassified non-coding RNA gene	Chr4:19914063-20186507 (+)
CAST/EiJ	ENSTCUG00005000464	lncRNA gene	Chr4:21624086-21923110 (+)
CBA/J	ENSMUSG00210004927	lncRNA gene	Chr4:21858272-22162849 (+)
DBA/2J	ENSMUSG00185000414	lncRNA gene	Chr4:21949859-22254436 (+)
FVB/NJ	ENSMUSG00205000568	lncRNA gene	Chr4:21431456-21764275 (+)
JF1/MsJ	ENSUMUG00000002852	lncRNA gene	Chr4:21900704-22208176 (+)
LP/J	ENSMUSG00230000637	lncRNA gene	Chr4:25234323-25514441 (+)
NOD/ShiLtJ	ENSMUSG00190000617	lncRNA gene	Chr4:21849792-22161704 (+)
NZO/HlLtJ	ENSMUSG00225001955	lncRNA gene	Chr4:29155581-29459779 (+)
PWK/PhJ	ENSLUMG00010007886	lncRNA gene	Chr4:21349083-21622376 (+)
SPRET/EiJ	ENSMSPG00010002740	lncRNA gene	Chr4:22002985-22304854 (+)
WSB/EiJ	ENSIUOG00005005446	lncRNA gene	Chr4:21594582-21898741 (+)

Homology

• Gene Tree
  Gm11906
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000085885 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085885	Ensembl Gene Model | MGI Sequence Detail	304583	C57BL/6J
transcript	ENSMUST00000124792	Ensembl | MGI Sequence Detail	680	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11906:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36642	Chr4:24966428-24966502 (+)	-52 bp
Tssr36643	Chr4:24972464-24972469 (+)	5,950 bp
Tssr36644	Chr4:24972508-24972521 (+)	5,998 bp