Gm10353 Gene Detail

Summary

• Symbol
  Gm10353
• Name
  predicted gene 10353

• Feature Type
  lncRNA gene
• IDs
  MGI:3704491
  NCBI Gene: 102640526
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:8913425-8918228 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 6.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704491	lncRNA gene	Chr19:8913425-8919754 (-)
129S1/SvImJ	ENSMUSG00200052247	protein coding gene	Chr19:5638812-5646089 (-)
129S1/SvImJ	ENSMUSG00200053220	lncRNA gene	Chr19:5640075-5643964 (-)
A/J	ENSMUSG00195044253	protein coding gene	Chr19:6040606-6047873 (-)
A/J	ENSMUSG00195053293	lncRNA gene	Chr19:6041865-6045753 (-)
AKR/J	ENSMUSG00220051227	lncRNA gene	Chr19:5814826-5818716 (-)
AKR/J	ENSMUSG00220049870	protein coding gene	Chr19:5813563-5820841 (-)
BALB/cJ	ENSMUSG00180044596	protein coding gene	Chr19:6404569-6411837 (-)
BALB/cJ	ENSMUSG00180051576	lncRNA gene	Chr19:6405828-6409717 (-)
C3H/HeJ	ENSMUSG00175015421	lncRNA gene	Chr19:5679573-5683461 (-)
C3H/HeJ	ENSMUSG00175013472	protein coding gene	Chr19:5678312-5685581 (-)
C57BL/6NJ	ENSMUSG00215048134	lncRNA gene	Chr19:5880549-5884439 (-)
C57BL/6NJ	ENSMUSG00215045519	protein coding gene	Chr19:5879284-5886565 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043437	lncRNA gene	Chr19:5517644-5521571 (-)
CBA/J	ENSMUSG00210050666	lncRNA gene	Chr19:5695058-5698948 (-)
CBA/J	ENSMUSG00210045369	protein coding gene	Chr19:5693795-5701073 (-)
DBA/2J	ENSMUSG00185051863	protein coding gene	Chr19:6048454-6055733 (-)
DBA/2J	ENSMUSG00185054013	lncRNA gene	Chr19:6049719-6053608 (-)
FVB/NJ	ENSMUSG00205052815	lncRNA gene	Chr19:5737485-5741375 (-)
FVB/NJ	ENSMUSG00205033088	protein coding gene	Chr19:5736222-5743500 (-)
JF1/MsJ	ENSUMUG00000056432	lncRNA gene	Chr19:6286953-6290866 (-)
LP/J	ENSMUSG00230052428	protein coding gene	Chr19:6965449-6972726 (-)
LP/J	ENSMUSG00230054386	lncRNA gene	Chr19:6966712-6970601 (-)
NOD/ShiLtJ	ENSMUSG00190049703	protein coding gene	Chr19:5573860-5581137 (-)
NOD/ShiLtJ	ENSMUSG00190052711	lncRNA gene	Chr19:5575123-5579012 (-)
NZO/HlLtJ	ENSMUSG00225046924	lncRNA gene	Chr19:10675526-10679415 (-)
NZO/HlLtJ	ENSMUSG00225045817	protein coding gene	Chr19:10674263-10681540 (-)
PWK/PhJ	ENSLUMG00010008932	lncRNA gene	Chr19:5723413-5727325 (-)
SPRET/EiJ	ENSMSPG00010051336	lncRNA gene	Chr19:5630319-5634349 (-)
WSB/EiJ	ENSIUOG00005050875	lncRNA gene	Chr19:5403887-5407775 (-)

Homology

• Gene Tree
  Gm10353
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000114220 (Evidence)
• NCBI Gene
  102640526

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114220	Ensembl Gene Model | MGI Sequence Detail	4804	C57BL/6J
transcript	ENSMUST00000306637	Ensembl | MGI Sequence Detail	1088	Not Applicable
polypeptide	Q3UZW1	UniProt | EBI | MGI Sequence Detail	190	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;