Gm10817 Gene Detail

Summary

• Symbol
  Gm10817
• Name
  predicted gene 10817

• Feature Type
  lncRNA gene
• IDs
  MGI:3704489
  NCBI Gene: 321016
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:5168066-5183629 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  332 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704489	lncRNA gene	Chr19:5168066-5183629 (+)
129S1/SvImJ	ENSMUSG00200053262	lncRNA gene	Chr19:1928436-1929727 (+)
A/J	ENSMUSG00195054081	lncRNA gene	Chr19:2323700-2324991 (+)
AKR/J	ENSMUSG00220051521	lncRNA gene	Chr19:2096775-2098066 (+)
BALB/cJ	ENSMUSG00180051443	lncRNA gene	Chr19:2698423-2699714 (+)
C3H/HeJ	ENSMUSG00175014920	lncRNA gene	Chr19:1943138-1944429 (+)
C57BL/6NJ	ENSMUSG00215047250	lncRNA gene	Chr19:2166616-2167907 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044946	lncRNA gene	Chr19:2087040-2088331 (+)
CBA/J	ENSMUSG00210050447	lncRNA gene	Chr19:1947257-1948548 (+)
DBA/2J	ENSMUSG00185052540	lncRNA gene	Chr19:2323721-2325012 (+)
FVB/NJ	ENSMUSG00205052361	lncRNA gene	Chr19:2326889-2328180 (+)
JF1/MsJ	ENSUMUG00000056287	lncRNA gene	Chr19:2307148-2308438 (+)
LP/J	ENSMUSG00230054290	lncRNA gene	Chr19:3235379-3236670 (+)
NOD/ShiLtJ	ENSMUSG00190053215	lncRNA gene	Chr19:1858188-1859479 (+)
NZO/HlLtJ	ENSMUSG00225026801	lncRNA gene	Chr19:6944125-6945416 (+)
PWK/PhJ	ENSLUMG00010008899	lncRNA gene	Chr19:2079795-2081085 (+)
SPRET/EiJ	ENSMSPG00010051552	lncRNA gene	Chr19:2070901-2072199 (+)
WSB/EiJ	ENSIUOG00005050989	lncRNA gene	Chr19:1958478-1959769 (+)

Homology

• Gene Tree
  Gm10817
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• UniProt
  1

• Ensembl
  ENSMUSG00000117710 (Evidence)
• NCBI Gene
  321016

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117710	Ensembl Gene Model | MGI Sequence Detail	15564	C57BL/6J
transcript	ENSMUST00000300338	Ensembl | MGI Sequence Detail	1481	Not Applicable
polypeptide	Q9CRL8	UniProt | EBI | MGI Sequence Detail	161	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14