Gm10233 Pseudogene Detail

Summary

• Symbol
  Gm10233
• Name
  predicted pseudogene 10233

• Feature Type
  pseudogene
• IDs
  MGI:3704447
  NCBI Gene: 100043675
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:66282529-66283156 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 34.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704447	pseudogene	Chr14:66282390-66283532 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011906	pseudogene	Chr2:151118165-151119128 (+)
A/J	MGP_AJ_G0011897	pseudogene	Chr2:144987585-144988421 (+)
AKR/J	MGP_AKRJ_G0011862	pseudogene	Chr2:149224937-149225776 (+)
BALB/cJ	MGP_BALBcJ_G0011873	pseudogene	Chr2:145425199-145426035 (+)
C3H/HeJ	MGP_C3HHeJ_G0011755	pseudogene	Chr2:149680799-149681635 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0010653	pseudogene	Chr2:139073750-139074582 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011730	pseudogene	Chr2:161225842-161226678 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0011788	pseudogene	Chr2:142807527-142808363 (+)
LP/J	MGP_LPJ_G0011853	pseudogene	Chr2:151275426-151276265 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014001	pseudogene	Chr8:120237021-120237897 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0011391	pseudogene	Chr2:143957146-143957985 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011208	pseudogene	Chr2:148169446-148170282 (+)
WSB/EiJ	MGP_WSBEiJ_G0011562	pseudogene	Chr2:150137318-150138154 (+)

Homology

• Gene Tree
  Gm10233
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10233
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000068165 (Evidence)
• NCBI Gene
  100043675

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000068165	Ensembl Gene Model | MGI Sequence Detail	628	C57BL/6J
transcript	ENSMUST00000089275	Ensembl | MGI Sequence Detail	628	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;