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BC001981 Gene Detail
Summary
  • Symbol
    BC001981
  • Name
    cDNA sequence BC001981
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3704411
    NCBI Gene: 100049162
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:100243303-100244847 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704411
 lncRNA gene Chr13:100243303-100244847 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003210
 antisense lncRNA gene Chr13:101939426-101940970 (-)
A/J MGP_AJ_G0003186
 antisense lncRNA gene Chr13:98016296-98017840 (-)
AKR/J MGP_AKRJ_G0003168
 antisense lncRNA gene Chr13:101011238-101012782 (-)
BALB/cJ MGP_BALBcJ_G0003173
 antisense lncRNA gene Chr13:98723402-98724946 (-)
C3H/HeJ MGP_C3HHeJ_G0003129
 antisense lncRNA gene Chr13:100730680-100732224 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003316
 antisense lncRNA gene Chr13:104969381-104970925 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002843
 antisense lncRNA gene Chr13:93729728-93731300 (-)
CAST/EiJ MGP_CASTEiJ_G0003095
 antisense lncRNA gene Chr13:100174381-100175923 (-)
CBA/J MGP_CBAJ_G0003126
 antisense lncRNA gene Chr13:109142001-109143544 (-)
DBA/2J MGP_DBA2J_G0003131
 antisense lncRNA gene Chr13:97779018-97780595 (-)
FVB/NJ MGP_FVBNJ_G0003149
 antisense lncRNA gene Chr13:96524402-96525946 (-)
LP/J MGP_LPJ_G0003207
 antisense lncRNA gene Chr13:102021915-102023459 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003140
 antisense lncRNA gene Chr13:109390236-109391561 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003317
 antisense lncRNA gene Chr13:100470420-100471963 (-)
PWK/PhJ MGP_PWKPhJ_G0003053
 antisense lncRNA gene Chr13:96610759-96612299 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002999
 antisense lncRNA gene Chr13:96750473-96752020 (-)
WSB/EiJ MGP_WSBEiJ_G0003129
 antisense lncRNA gene Chr13:100895481-100897025 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097022 Ensembl Gene Model | MGI Sequence Detail 1545 C57BL/6J ±  kb
transcript ENSMUST00000191393 Ensembl | MGI Sequence Detail 1545 Not Applicable  
polypeptide Q99M62 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 9
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory