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Gm10039 Pseudogene Detail
Summary
  • Symbol
    Gm10039
  • Name
    predicted pseudogene 10039
  • Feature Type
    pseudogene
  • IDs
    MGI:3704382
    NCBI Gene: 100041835
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:100252542-100252952 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 11, 63.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704382
pseudogene Chr11:100252234-100252983 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011204
pseudogene Chr15:81344712-81345106 (+)
A/J MGP_AJ_G0011194
pseudogene Chr15:78499354-78499748 (+)
AKR/J MGP_AKRJ_G0011153
pseudogene Chr15:80693453-80693847 (+)
BALB/cJ MGP_BALBcJ_G0011162
pseudogene Chr15:78505279-78505673 (+)
C3H/HeJ MGP_C3HHeJ_G0011061
pseudogene Chr15:80678988-80679382 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011459
pseudogene Chr15:84530658-84531052 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011041
pseudogene Chr15:87178342-87178736 (+)
DBA/2J MGP_DBA2J_G0011089
pseudogene Chr15:77989369-77989763 (+)
FVB/NJ MGP_FVBNJ_G0011090
pseudogene Chr15:77023277-77023671 (+)
LP/J MGP_LPJ_G0011180
pseudogene Chr15:81509107-81509501 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011085
pseudogene Chr15:92169800-92170194 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011436
pseudogene Chr15:80737772-80738166 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0010579
pseudogene Chr15:80533534-80533942 (+)
WSB/EiJ MGP_WSBEiJ_G0010932
pseudogene Chr15:81145774-81146168 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091478 Ensembl Gene Model | MGI Sequence Detail 411 C57BL/6J ±  kb
transcript ENSMUST00000081241 Ensembl | MGI Sequence Detail 411 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:50799 Liu P, et al., Embryonic lethality and tumorigenesis caused by segmental aneuploidy on mouse chromosome 11. Genetics. 1998 Nov;150(3):1155-68
  • Latest
    J:232020 Ermakova O, et al., Sensitized phenotypic screening identifies gene dosage sensitive region on chromosome 11 that predisposes to disease in mice. EMBO Mol Med. 2011 Jan;3(1):50-66

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory