Gm10322 Gene Detail

Summary

• Symbol
  Gm10322
• Name
  predicted gene 10322

• Feature Type
  lncRNA gene
• IDs
  MGI:3704363
  NCBI Gene: 100039225
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:59451885-59453238 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704363	lncRNA gene	Chr10:59451672-59453745 (+)
129S1/SvImJ	ENSMUSG00200029947	lncRNA gene	Chr10:56116116-56117469 (+)
A/J	ENSMUSG00195029045	lncRNA gene	Chr10:56415863-56417216 (+)
AKR/J	ENSMUSG00220042767	lncRNA gene	Chr10:56120707-56122060 (+)
BALB/cJ	ENSMUSG00180028016	lncRNA gene	Chr10:56470880-56472233 (+)
C3H/HeJ	ENSMUSG00175026558	lncRNA gene	Chr10:56323437-56324790 (+)
C57BL/6NJ	ENSMUSG00215031522	lncRNA gene	Chr10:56069013-56070366 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015346	protein coding gene	Chr10:54106575-54106925 (+)
CAST/EiJ	ENSTCUG00005029473	lncRNA gene	Chr10:56111963-56113332 (+)
CBA/J	ENSMUSG00210039027	lncRNA gene	Chr10:56201766-56203119 (+)
DBA/2J	ENSMUSG00185042803	lncRNA gene	Chr10:56548515-56549868 (+)
FVB/NJ	ENSMUSG00205037757	lncRNA gene	Chr10:56220869-56222222 (+)
JF1/MsJ	ENSUMUG00000022699	lncRNA gene	Chr10:57780174-57781543 (+)
LP/J	ENSMUSG00230023615	lncRNA gene	Chr10:58351761-58353114 (+)
NOD/ShiLtJ	ENSMUSG00190038888	lncRNA gene	Chr10:56534350-56535703 (+)
NZO/HlLtJ	ENSMUSG00225045723	lncRNA gene	Chr10:62632670-62634023 (+)
PWK/PhJ	ENSLUMG00010024039	lncRNA gene	Chr10:56147018-56148383 (+)
SPRET/EiJ	ENSMSPG00010026499	lncRNA gene	Chr10:57713663-57715019 (+)
WSB/EiJ	ENSIUOG00005041876	lncRNA gene	Chr10:56098632-56099985 (+)

Homology

• Gene Tree
  Gm10322
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10322
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000071280 (Evidence)
• NCBI Gene
  100039225

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000071280	Ensembl Gene Model | MGI Sequence Detail	1354	C57BL/6J
transcript	ENSMUST00000238281	Ensembl | MGI Sequence Detail	1353	Not Applicable
polypeptide	Q8BV56	UniProt | EBI | MGI Sequence Detail	111	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87