Gm10275 Pseudogene Detail

Summary

• Symbol
  Gm10275
• Name
  predicted pseudogene 10275

• Feature Type
  pseudogene
• IDs
  MGI:3704354
  NCBI Gene: 19897
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:29574792-29575286 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 16.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704354	pseudogene	Chr10:29574742-29575375 (-)
129S1/SvImJ	ENSMUSG00200005112	pseudogene	Chr1:38023204-38023817 (+)
129S1/SvImJ	ENSMUSG00200010060	pseudogene	Chr10:26411100-26411758 (-)
A/J	ENSMUSG00195014719	pseudogene	Chr10:26693054-26693712 (-)
A/J	ENSMUSG00195045568	pseudogene	Chr1:37692565-37693178 (+)
AKR/J	ENSMUSG00220010060	pseudogene	Chr1:37677551-37678164 (+)
AKR/J	ENSMUSG00220011620	pseudogene	Chr10:26387738-26388396 (-)
AKR/J	ENSMUSG00220036867	pseudogene	Chr13:13984841-13985443 (-)
BALB/cJ	ENSMUSG00180017866	pseudogene	Chr10:26818174-26818832 (-)
C3H/HeJ	ENSMUSG00175025305	pseudogene	Chr10:26554081-26554739 (-)
C3H/HeJ	ENSMUSG00175001648	pseudogene	Chr1:37695547-37696160 (+)
C57BL/6NJ	ENSMUSG00215013346	pseudogene	Chr10:26366329-26366987 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014314	pseudogene	Chr10:26200543-26200894 (-)
CBA/J	ENSMUSG00210023500	pseudogene	Chr10:26500798-26501456 (-)
DBA/2J	ENSMUSG00185007469	pseudogene	Chr10:26653455-26654113 (-)
FVB/NJ	ENSMUSG00205010476	pseudogene	Chr10:26639304-26639962 (-)
FVB/NJ	ENSMUSG00205041283	pseudogene	Chr1:37700004-37700617 (+)
FVB/NJ	ENSMUSG00205007826	pseudogene	Chr13:101394418-101395046 (-)
JF1/MsJ	ENSUMUG00000017529	pseudogene	Chr10:26460484-26460833 (-)
LP/J	ENSMUSG00230012065	pseudogene	Chr10:28421500-28422158 (-)
NOD/ShiLtJ	ENSMUSG00190044003	pseudogene	Chr1:37709282-37709895 (+)
NOD/ShiLtJ	ENSMUSG00190015477	pseudogene	Chr10:26758699-26759357 (-)
NZO/HlLtJ	ENSMUSG00225001197	pseudogene	Chr1:41885100-41885713 (+)
NZO/HlLtJ	ENSMUSG00225034395	pseudogene	Chr10:32680482-32681140 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010015187	pseudogene	Chr10:27270323-27270674 (-)
WSB/EiJ	ENSIUOG00005032386	pseudogene	Chr10:26131959-26132307 (-)

Homology

• Gene Tree
  Gm10275
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10275
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000069682 (Evidence)
• NCBI Gene
  19897

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000069682	Ensembl Gene Model | MGI Sequence Detail	495	C57BL/6J
transcript	ENSMUST00000168697	Ensembl | MGI Sequence Detail	495	Not Applicable

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87