Gm10284 Pseudogene Detail

Summary

• Symbol
  Gm10284
• Name
  predicted pseudogene 10284

• Feature Type
  pseudogene
• IDs
  MGI:3704311
  NCBI Gene: 100040634
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:58003333-58004337 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 29.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704311	pseudogene	Chr8:58003318-58004518 (+)
129S1/SvImJ	ENSMUSG00200007560	pseudogene	Chr8:52789313-52790317 (+)
A/J	ENSMUSG00195012246	pseudogene	Chr8:53190892-53191896 (+)
AKR/J	ENSMUSG00220047373	pseudogene	Chr6:67850750-67851749 (+)
AKR/J	ENSMUSG00220005893	pseudogene	Chr8:53008511-53009515 (+)
BALB/cJ	ENSMUSG00180014153	pseudogene	Chr8:52838684-52839688 (+)
C3H/HeJ	ENSMUSG00175007583	pseudogene	Chr8:53015917-53016921 (+)
C57BL/6NJ	ENSMUSG00215011136	pseudogene	Chr8:52808652-52809656 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210009224	pseudogene	Chr8:52865012-52866016 (+)
DBA/2J	ENSMUSG00185008886	pseudogene	Chr8:58997959-58998963 (+)
FVB/NJ	ENSMUSG00205013173	pseudogene	Chr8:52252928-52253932 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230006997	pseudogene	Chr8:62656983-62657987 (+)
NOD/ShiLtJ	ENSMUSG00190009843	pseudogene	Chr8:52786232-52787236 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005017057	pseudogene	Chr8:53711057-53712061 (+)

Homology

• Gene Tree
  Gm10284
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10284
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000070025 (Evidence)
• NCBI Gene
  100040634

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000070025	Ensembl Gene Model | MGI Sequence Detail	1005	C57BL/6J
transcript	ENSMUST00000145057	Ensembl | MGI Sequence Detail	1005	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;