Proscos Gene Detail

Summary

• Symbol
  Proscos
• Name
  proline synthetase co-transcribed, opposite strand
• Synonyms
  1700024N20Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3704307
  NCBI Gene: 100328574
• Alliance
  genome feature page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr8:27531099-27533123 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 15.91 cM

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704307	antisense lncRNA gene	Chr8:27531099-27533123 (-)
129S1/SvImJ	ENSMUSG00200021968	lncRNA gene	Chr8:22621525-22622245 (-)
129S1/SvImJ	ENSMUSG00200020695	protein coding gene	Chr8:22621448-22622188 (-)
A/J	ENSMUSG00195004746	protein coding gene	Chr8:23129985-23130725 (-)
A/J	ENSMUSG00195005882	lncRNA gene	Chr8:23130062-23130782 (-)
AKR/J	ENSMUSG00220025985	lncRNA gene	Chr8:22767958-22768678 (-)
BALB/cJ	ENSMUSG00180005815	lncRNA gene	Chr8:22654679-22655399 (-)
BALB/cJ	ENSMUSG00180005268	protein coding gene	Chr8:22654602-22655342 (-)
C3H/HeJ	ENSMUSG00175006974	lncRNA gene	Chr8:22730512-22731232 (-)
C57BL/6NJ	ENSMUSG00215012978	lncRNA gene	Chr8:22618937-22619657 (-)
C57BL/6NJ	ENSMUSG00215010259	protein coding gene	Chr8:22618860-22619600 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004116	antisense lncRNA gene	Chr8:21514625-21515285 (-)
CAST/EiJ	ENSTCUG00005024743	lncRNA gene	Chr8:22923377-22924097 (-)
CBA/J	ENSMUSG00210014046	lncRNA gene	Chr8:22653739-22654459 (-)
CBA/J	ENSMUSG00210013376	protein coding gene	Chr8:22653662-22654402 (-)
DBA/2J	ENSMUSG00185039824	lncRNA gene	Chr8:28470092-28470812 (-)
FVB/NJ	ENSMUSG00205004718	lncRNA gene	Chr8:22159328-22160047 (-)
JF1/MsJ	ENSUMUG00000008716	lncRNA gene	Chr8:30319825-30320543 (-)
LP/J	ENSMUSG00230016382	lncRNA gene	Chr8:32213910-32214630 (-)
LP/J	ENSMUSG00230012754	protein coding gene	Chr8:32213833-32214573 (-)
NOD/ShiLtJ	ENSMUSG00190004146	protein coding gene	Chr8:22697037-22697777 (-)
NOD/ShiLtJ	ENSMUSG00190004730	lncRNA gene	Chr8:22697114-22697834 (-)
NZO/HlLtJ	ENSMUSG00225022400	lncRNA gene	Chr8:35846797-35847517 (-)
PWK/PhJ	ENSLUMG00010026615	lncRNA gene	Chr8:22704515-22705238 (-)
SPRET/EiJ	ENSMSPG00010017248	lncRNA gene	Chr8:22996842-22997563 (-)
WSB/EiJ	ENSIUOG00005011097	lncRNA gene	Chr8:23378581-23379301 (-)

Homology

• Gene Tree
  Proscos
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• UniProt
  1

• Ensembl
  ENSMUSG00000091154 (Evidence)
• NCBI Gene
  100328574

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091154	Ensembl Gene Model | MGI Sequence Detail	2025	C57BL/6J
transcript	ENSMUST00000178990	Ensembl | MGI Sequence Detail	2025	Not Applicable
polypeptide	Q9D9Z8	UniProt | EBI | MGI Sequence Detail	134	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Proscos:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80765	Chr8:27533078-27533089 (-)	39 bp
Tssr80764	Chr8:27533062-27533075 (-)	54 bp
Tssr80763	Chr8:27533037-27533060 (-)	74 bp
Tssr80762	Chr8:27533009-27533032 (-)	102 bp
Tssr80761	Chr8:27532754-27532769 (-)	361 bp
Tssr80760	Chr8:27532710-27532732 (-)	402 bp