Gm15501 MGI Mouse Pseudogene Detail - MGI:3704296

Symbol

Gm15501
Name

predicted pseudogene 15501

Feature Type

pseudogene

BioType Conflict
IDs

MGI:3704296
NCBI Gene: 100040298
Alliance

genome feature page
Transcription Start Sites

1 TSS

Sequence Map

Chr7:92828228-92828852 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 7, 51.66 cM
Mapping Data

1 experiment

SNPs within 2kb

140 from dbSNP Build 142
Strain Annotations

32

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704296	pseudogene	Chr7:92828169-92833383 (-)
129S1/SvImJ	ENSMUSG00200045221	protein coding gene	Chr4:110907362-110909778 (-)
129S1/SvImJ	ENSMUSG00200028903	pseudogene	Chr7:79606119-79610571 (-)
A/J	ENSMUSG00195039876	pseudogene	Chr7:84119642-84124968 (-)
A/J	ENSMUSG00195032405	protein coding gene	Chr4:112174212-112176758 (-)
A/J	ENSMUSG00195038441	protein coding gene	Chr13:22974237-22974953 (+)
AKR/J	ENSMUSG00220043823	pseudogene	Chr7:77585686-77591013 (-)
AKR/J	ENSMUSG00220012793	protein coding gene	Chr13:22784759-22785474 (+)
BALB/cJ	ENSMUSG00180041064	pseudogene	Chr7:80788011-80793337 (-)
BALB/cJ	ENSMUSG00180022319	protein coding gene	Chr13:23279519-23280234 (+)
BALB/cJ	ENSMUSG00180042522	protein coding gene	Chr4:110241415-110243830 (-)
C3H/HeJ	ENSMUSG00175025195	pseudogene	Chr7:81487976-81493300 (-)
C3H/HeJ	ENSMUSG00175034713	protein coding gene	Chr4:111255783-111258198 (-)
C57BL/6NJ	ENSMUSG00215016976	protein coding gene	Chr4:112335280-112337696 (-)
C57BL/6NJ	ENSMUSG00215030979	pseudogene	Chr7:80674870-80680063 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033269	pseudogene	Chr7:84067440-84071891 (-)
CBA/J	ENSMUSG00210052936	protein coding gene	Chr4:110869490-110871905 (-)
CBA/J	ENSMUSG00210025539	pseudogene	Chr7:81329804-81335128 (-)
DBA/2J	ENSMUSG00185033980	pseudogene	Chr7:85659624-85664948 (-)
DBA/2J	ENSMUSG00185018761	protein coding gene	Chr13:24068471-24069187 (+)
FVB/NJ	ENSMUSG00205023629	protein coding gene	Chr4:110338856-110341271 (-)
JF1/MsJ	ENSUMUG00000022310	pseudogene	Chr7:90607263-90611724 (-)
LP/J	ENSMUSG00230019830	protein coding gene	Chr13:33389875-33390590 (+)
LP/J	ENSMUSG00230045766	pseudogene	Chr7:91748597-91753921 (-)
NOD/ShiLtJ	ENSMUSG00190040461	protein coding gene	Chr4:110237424-110239839 (-)
NOD/ShiLtJ	ENSMUSG00190027012	protein coding gene	Chr13:23050580-23051295 (+)
NOD/ShiLtJ	ENSMUSG00190023120	pseudogene	Chr7:81539101-81544425 (-)
NZO/HlLtJ	ENSMUSG00225009296	protein coding gene	Chr4:121213062-121215477 (-)
NZO/HlLtJ	ENSMUSG00225012066	pseudogene	Chr7:90023667-90028990 (-)
NZO/HlLtJ	ENSMUSG00225043744	protein coding gene	Chr13:27176086-27176801 (+)
PWK/PhJ	ENSLUMG00010040876	pseudogene	Chr7:79801575-79806126 (-)
SPRET/EiJ	ENSMSPG00010013405	pseudogene	Chr7:80915944-80920517 (-)
WSB/EiJ	no annotation

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Gene Tree

Gm15501

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Phenotype Summary

22 phenotype references

All Mutations and Alleles

3
Chemically induced (other)

1
Radiation induced

2
Genomic Mutations

3 involving Gm15501
Find Mice (IMSR)

0 strains or lines available

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

1

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

42
RefSeq

4

Ensembl

ENSMUSG00000087412 (Evidence)
NCBI Gene

100040298

			Length	Strain/Species	Flank
genomic	ENSMUSG00000087412	Ensembl Gene Model \| MGI Sequence Detail	625	C57BL/6J	± kb
transcript	ENSMUST00000140687	Ensembl \| MGI Sequence Detail	625	Not Applicable
polypeptide	NP_001363970	RefSeq \| MGI Sequence Detail	208	C57BL/6

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All nucleic 1

cDNA 1

Summaries

All 29

Phenotypes 22
Earliest

J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
Latest

J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Gm15501:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr73562	Chr7:92828876-92828885 (-)	-29 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/15/2026 MGI 6.29