Josd1-ps Pseudogene Detail

Summary

• Symbol
  Josd1-ps
• Name
  Josephin domain containing 1, pseudogene
• Synonyms
  Gm10651

• Feature Type
  pseudogene
• IDs
  MGI:3704290
  NCBI Gene: 100043771
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:27648580-27649188 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 15.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704290	pseudogene	Chr7:27648336-27649260 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011203	pseudogene	Chr15:79976739-79987568 (-)
A/J	MGP_AJ_G0011193	pseudogene	Chr15:77205311-77217223 (-)
AKR/J	MGP_AKRJ_G0011152	pseudogene	Chr15:79368477-79380811 (-)
BALB/cJ	MGP_BALBcJ_G0011161	pseudogene	Chr15:77220311-77231014 (-)
C3H/HeJ	MGP_C3HHeJ_G0011060	pseudogene	Chr15:79356045-79366885 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0010040	pseudogene	Chr15:73681319-73692438 (-)
CAST/EiJ	MGP_CASTEiJ_G0010884	pseudogene	Chr15:80063259-80076636 (-)
CBA/J	MGP_CBAJ_G0011040	pseudogene	Chr15:85710572-85725449 (-)
DBA/2J	MGP_DBA2J_G0011088	pseudogene	Chr15:76692558-76704131 (-)
FVB/NJ	MGP_FVBNJ_G0011089	pseudogene	Chr15:75720322-75731216 (-)
LP/J	MGP_LPJ_G0011179	pseudogene	Chr15:80161412-80174497 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011084	pseudogene	Chr15:90800073-90824213 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011435	pseudogene	Chr15:79385459-79397453 (-)
PWK/PhJ	MGP_PWKPhJ_G0010757	pseudogene	Chr15:76703382-76714009 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010578	pseudogene	Chr15:79186409-79198284 (-)
WSB/EiJ	MGP_WSBEiJ_G0010931	pseudogene	Chr15:79772144-79782652 (-)

Homology

• Gene Tree
  Josd1-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000074243 (Evidence)
• NCBI Gene
  100043771

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074243	Ensembl Gene Model | MGI Sequence Detail	609	C57BL/6J
transcript	ENSMUST00000118212	Ensembl | MGI Sequence Detail	609	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;