G630022F23Rik Gene Detail

Summary

• Symbol
  G630022F23Rik
• Name
  RIKEN cDNA G630022F23 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3704248
  NCBI Gene: 100048901
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:33877387-33881013 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3704248	lncRNA gene	Chr5:33877387-33881013 (-)
129S1/SvImJ	ENSMUSG00200015004	unclassified gene	Chr5:29346021-29349647 (-)
A/J	ENSMUSG00195049272	unclassified gene	Chr5:28823713-28827341 (-)
AKR/J	ENSMUSG00220009526	unclassified gene	Chr5:28844146-28847774 (-)
BALB/cJ	ENSMUSG00180038967	unclassified gene	Chr5:28626663-28630291 (-)
C3H/HeJ	ENSMUSG00175050062	unclassified gene	Chr5:30606272-30609900 (-)
C57BL/6NJ	ENSMUSG00215041767	unclassified gene	Chr5:29343176-29346802 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001232	unclassified gene	Chr5:28674524-28678149 (-)
CAST/EiJ	ENSTCUG00005025035	unclassified gene	Chr5:28829647-28833224 (-)
CBA/J	ENSMUSG00210049171	unclassified gene	Chr5:29573971-29577599 (-)
DBA/2J	ENSMUSG00185017697	unclassified gene	Chr5:31438450-31442074 (-)
FVB/NJ	ENSMUSG00205042752	unclassified gene	Chr5:28329215-28332842 (-)
JF1/MsJ	ENSUMUG00000055397	unclassified gene	Chr5:36046993-36050606 (-)
LP/J	ENSMUSG00230048122	unclassified gene	Chr5:36049699-36053325 (-)
NOD/ShiLtJ	ENSMUSG00190017088	unclassified gene	Chr5:28603164-28606790 (-)
NZO/HlLtJ	ENSMUSG00225017526	unclassified gene	Chr5:41255922-41259548 (-)
PWK/PhJ	ENSLUMG00010049797	unclassified gene	Chr5:28742296-28745897 (-)
SPRET/EiJ	ENSMSPG00010044066	unclassified gene	Chr5:29917435-29921040 (-)
WSB/EiJ	ENSIUOG00005018348	unclassified gene	Chr5:31533277-31536903 (-)

Homology

• Gene Tree
  G630022F23Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (ENU)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving G630022F23Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000106896 (Evidence)
• NCBI Gene
  100048901

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106896	Ensembl Gene Model | MGI Sequence Detail	3627	C57BL/6J
transcript	AK144327	GenBank | ENA | DDBJ | MGI Sequence Detail	3627	C57BL/6J
polypeptide	Q3UNB1	UniProt | EBI | MGI Sequence Detail	140	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 24

  Diseases 1

  Phenotypes 17
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707