About   Help   FAQ
Csnk2a1-ps3 Pseudogene Detail
Summary
  • Symbol
    Csnk2a1-ps3
  • Name
    casein kinase 2, alpha 1 polypeptide, pseudogene 3
  • Synonyms
    Csnk2a1-rs3, Csnk2a3, Gm10031
  • Feature Type
    pseudogene
  • IDs
    MGI:3704198
    NCBI Gene: 100039026
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:156351582-156354214 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1,
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3704198
pseudogene Chr1:156351541-156354234 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035578
protein coding gene ChrX:11465817-11468493 (+)
A/J MGP_AJ_G0035555
protein coding gene ChrX:11559879-11562555 (+)
AKR/J MGP_AKRJ_G0035487
protein coding gene ChrX:11918718-11921394 (+)
BALB/cJ MGP_BALBcJ_G0035548
protein coding gene ChrX:11372556-11375232 (+)
C3H/HeJ MGP_C3HHeJ_G0035265
protein coding gene ChrX:11600637-11603313 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036083
protein coding gene ChrX:11754548-11757224 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032948
protein coding gene ChrX:10113433-10114969 (+)
CAST/EiJ MGP_CASTEiJ_G0034557
protein coding gene ChrX:11119154-11121590 (-)
CBA/J MGP_CBAJ_G0035234
protein coding gene ChrX:12293856-12296532 (+)
DBA/2J MGP_DBA2J_G0035386
protein coding gene ChrX:11409728-11412404 (+)
FVB/NJ MGP_FVBNJ_G0035333
protein coding gene ChrX:11269161-11271837 (+)
LP/J MGP_LPJ_G0035468
protein coding gene ChrX:11753526-11756270 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035377
protein coding gene ChrX:12385818-12388494 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036090
protein coding gene ChrX:11394730-11397406 (+)
PWK/PhJ MGP_PWKPhJ_G0034258
protein coding gene ChrX:10734073-10736973 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034692
protein coding gene ChrX:11351823-11361954 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Gene trapped
    3
  • Genomic Mutations
    2 involving Csnk2a1-ps3
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101523 Ensembl Gene Model | MGI Sequence Detail 2633 C57BL/6J ±  kb
transcript ENSMUST00000190422 Ensembl | MGI Sequence Detail 2633 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
Other
Accession IDs
less
MGD-MRK-2204, MGI:88546
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:1588 Boldyreff B, et al., Identification of four genomic loci highly related to casein-kinase-2-alpha cDNA and characterization of a casein kinase-2-alpha pseudogene within the mouse genome. Biochem Biophys Res Commun. 1992 Jul 31;186(2):723-30
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Copyright, and Privacy Statement
Send questions and comments to User Support.
last database update
01/31/2023
MGI 6.22
The Jackson Laboratory