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Gm13054 Gene Detail
Summary
  • Symbol
    Gm13054
  • Name
    predicted gene 13054
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3702728
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:148085548-148088471 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 78.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    59 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702728
 lncRNA gene Chr4:148085548-148088471 (-)
129S1/SvImJ ENSMUSG00200047047
 lncRNA gene Chr4:139119316-139122179 (-)
A/J ENSMUSG00195036653
 lncRNA gene Chr4:140779296-140782219 (-)
AKR/J ENSMUSG00220048475
 lncRNA gene Chr4:140355237-140358100 (-)
BALB/cJ ENSMUSG00180047832
 lncRNA gene Chr4:138461973-138464896 (-)
C3H/HeJ ENSMUSG00175041901
 lncRNA gene Chr4:141735771-141738634 (-)
C57BL/6NJ ENSMUSG00215051214
 lncRNA gene Chr4:140585593-140588516 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003594
 antisense lncRNA gene Chr4:137841859-137844595 (-)
CAST/EiJ ENSTCUG00005035862
 lncRNA gene Chr4:144412120-144414918 (-)
CBA/J ENSMUSG00210030159
 lncRNA gene Chr4:140387473-140390336 (-)
DBA/2J ENSMUSG00185016766
 lncRNA gene Chr4:143949027-143951888 (-)
FVB/NJ ENSMUSG00205044392
 lncRNA gene Chr4:138855152-138858075 (-)
JF1/MsJ ENSUMUG00000007637
 lncRNA gene Chr4:146978133-146981058 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190035967
 lncRNA gene Chr4:140057364-140060228 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010046937
 lncRNA gene Chr4:139247064-139249927 (-)
SPRET/EiJ ENSMSPG00010035888
 lncRNA gene Chr4:141189183-141192398 (-)
WSB/EiJ ENSIUOG00005048001
 lncRNA gene Chr4:138227836-138230572 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Targeted
    1
  • Genomic Mutations
    3 involving Gm13054
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086806 Ensembl Gene Model | MGI Sequence Detail 2924 C57BL/6J ±  kb
transcript ENSMUST00000154192 Ensembl | MGI Sequence Detail 820 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 4
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:309962 Man JCK, et al., Genetic Dissection of a Super Enhancer Controlling the Nppa-Nppb Cluster in the Heart. Circ Res. 2021 Jan 8;128(1):115-129
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory