Gm13558 Gene Detail

Summary

• Symbol
  Gm13558
• Name
  predicted gene 13558

• Feature Type
  lncRNA gene
• IDs
  MGI:3702047
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:58570024-58629851 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 33.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1579 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702047	lncRNA gene	Chr2:58570024-58629851 (+)
129S1/SvImJ	ENSMUSG00200003145	lncRNA gene	Chr2:55660344-55689979 (+)
A/J	ENSMUSG00195005223	lncRNA gene	Chr2:55780798-55810434 (+)
AKR/J	ENSMUSG00220007475	lncRNA gene	Chr2:55882782-55912401 (+)
BALB/cJ	ENSMUSG00180021267	lncRNA gene	Chr2:55737117-55766746 (+)
C3H/HeJ	ENSMUSG00175013811	lncRNA gene	Chr2:55805756-55835381 (+)
C57BL/6NJ	ENSMUSG00215009637	lncRNA gene	Chr2:55790563-55820195 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034488	sense intronic lncRNA gene	Chr2:53608456-53637300 (+)
CAST/EiJ	ENSTCUG00005023389	lncRNA gene	Chr2:55137944-55162062 (+)
CBA/J	ENSMUSG00210034827	lncRNA gene	Chr2:55825209-55854834 (+)
DBA/2J	ENSMUSG00185008500	lncRNA gene	Chr2:55681210-55710838 (+)
FVB/NJ	ENSMUSG00205021900	lncRNA gene	Chr2:55318708-55348339 (+)
JF1/MsJ	ENSUMUG00000024451	lncRNA gene	Chr2:55367337-55397191 (+)
LP/J	ENSMUSG00230001900	lncRNA gene	Chr2:57543936-57573566 (+)
NOD/ShiLtJ	ENSMUSG00190045155	lncRNA gene	Chr2:55766467-55796094 (+)
NZO/HlLtJ	ENSMUSG00225001209	lncRNA gene	Chr2:65257223-65286834 (+)
PWK/PhJ	ENSLUMG00010005732	lncRNA gene	Chr2:55524307-55554064 (+)
SPRET/EiJ	ENSMSPG00010012086	lncRNA gene	Chr2:56643216-56682045 (+)
WSB/EiJ	ENSIUOG00005028271	lncRNA gene	Chr2:55776651-55806269 (+)

Homology

• Gene Tree
  Gm13558
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13558
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00000086129 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086129	Ensembl Gene Model | MGI Sequence Detail	59828	C57BL/6J
transcript	ENSMUST00000340646	Ensembl | MGI Sequence Detail	915	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;