C130013H08Rik MGI Mouse Gene Detail - MGI:3697343

Sequence Map

Chr3:110157331-110196553 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3697343	lncRNA gene	Chr3:110157331-110196553 (+)
129S1/SvImJ	ENSMUSG00200036009	lncRNA gene	Chr3:106772604-106776295 (+)
A/J	ENSMUSG00195026294	lncRNA gene	Chr3:107197187-107200878 (+)
AKR/J	ENSMUSG00220035226	lncRNA gene	Chr3:105570579-105574270 (+)
BALB/cJ	ENSMUSG00180021322	lncRNA gene	Chr3:107148184-107151875 (+)
C3H/HeJ	ENSMUSG00175032400	lncRNA gene	Chr3:106700721-106704412 (+)
C57BL/6NJ	ENSMUSG00215035774	lncRNA gene	Chr3:107432179-107435870 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003431	antisense lncRNA gene	Chr3:104380566-104384300 (+)
CAST/EiJ	ENSTCUG00005028076	lncRNA gene	Chr3:107653775-107657492 (+)
CBA/J	ENSMUSG00210009180	lncRNA gene	Chr3:107300736-107304427 (+)
DBA/2J	ENSMUSG00185022881	lncRNA gene	Chr3:107772789-107776480 (+)
FVB/NJ	ENSMUSG00205032722	lncRNA gene	Chr3:106322486-106326177 (+)
JF1/MsJ	ENSUMUG00000006261	lncRNA gene	Chr3:106741009-106744709 (+)
LP/J	ENSMUSG00230021402	lncRNA gene	Chr3:109683495-109687186 (+)
NOD/ShiLtJ	ENSMUSG00190042734	lncRNA gene	Chr3:108013207-108016898 (+)
NZO/HlLtJ	ENSMUSG00225003597	lncRNA gene	Chr3:112191924-112195615 (+)
PWK/PhJ	ENSLUMG00010025299	lncRNA gene	Chr3:106613284-106617006 (+)
SPRET/EiJ	ENSMSPG00010038221	lncRNA gene	Chr3:107149830-107153532 (+)
WSB/EiJ	ENSIUOG00005005356	lncRNA gene	Chr3:107323273-107326964 (+)

less

less

less

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

less

Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

less

Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000105509	Ensembl Gene Model \| MGI Sequence Detail	39223	C57BL/6J	± kb
	transcript	ENSMUST00000197569	Ensembl \| MGI Sequence Detail	3692	Not Applicable

less

Summaries

All 8

Phenotypes 2
Earliest

J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
Latest

J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for C130013H08Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24