Gm11691 Gene Detail

Summary

• Symbol
  Gm11691
• Name
  predicted gene 11691

• Feature Type
  lncRNA gene
• IDs
  MGI:3652328
  NCBI Gene: 100038601
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:114142669-114143953 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 79.65 cM

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652328	lncRNA gene	Chr11:114142669-114144498 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005316	lincRNA gene	Chr11:118116248-118117530 (+)
A/J	MGP_AJ_G0005299	lincRNA gene	Chr11:113020903-113022191 (+)
AKR/J	MGP_AKRJ_G0005278	lincRNA gene	Chr11:116345848-116347131 (+)
BALB/cJ	MGP_BALBcJ_G0005281	lincRNA gene	Chr11:113432002-113433284 (+)
C3H/HeJ	MGP_C3HHeJ_G0005230	lincRNA gene	Chr11:116702393-116703682 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005433	lincRNA gene	Chr11:121651035-121652319 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004823	lincRNA gene	Chr11:110093016-110094335 (+)
CAST/EiJ	MGP_CASTEiJ_G0005177	lincRNA gene	Chr11:117998804-118000085 (+)
CBA/J	MGP_CBAJ_G0005219	lincRNA gene	Chr11:126597438-126598726 (+)
DBA/2J	MGP_DBA2J_G0005237	lincRNA gene	Chr11:112456929-112458221 (+)
FVB/NJ	MGP_FVBNJ_G0005262	lincRNA gene	Chr11:111934988-111936275 (+)
LP/J	MGP_LPJ_G0005318	lincRNA gene	Chr11:118542713-118551628 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005244	lincRNA gene	Chr11:125726865-125728149 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005437	lincRNA gene	Chr11:117014339-117015626 (+)
PWK/PhJ	MGP_PWKPhJ_G0005126	lincRNA gene	Chr11:113679801-113681108 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005047	lincRNA gene	Chr11:116826346-116827630 (+)
WSB/EiJ	MGP_WSBEiJ_G0005225	lincRNA gene	Chr11:116972618-116975088 (+)

Homology

• Gene Tree
  Gm11691
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000075431 (Evidence)
• NCBI Gene
  100038601

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075431	Ensembl Gene Model | MGI Sequence Detail	1285	C57BL/6J
transcript	ENSMUST00000130963	Ensembl | MGI Sequence Detail	658	Not Applicable
polypeptide	Q3V0R3	UniProt | EBI | MGI Sequence Detail	71	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 12
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm11691:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr105773	Chr11:114142702-114142713 (+)	39 bp