Gm13474 Pseudogene Detail

Summary

• Symbol
  Gm13474
• Name
  predicted gene 13474

• Feature Type
  pseudogene
• IDs
  MGI:3652316
  NCBI Gene: 624652
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:38863959-38866828 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.42 cM

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652316	pseudogene	Chr2:38863959-38866828 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040225	pseudogene	Chr2:37769490-37772310 (+)
A/J	MGP_AJ_G0040209	pseudogene	Chr2:36221066-36224543 (+)
AKR/J	MGP_AKRJ_G0040143	pseudogene	Chr2:37411866-37417375 (+)
BALB/cJ	MGP_BALBcJ_G0040210	pseudogene	Chr2:36275133-36277917 (+)
C3H/HeJ	MGP_C3HHeJ_G0039849	pseudogene	Chr2:37323540-37327661 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040798	pseudogene	Chr2:38814936-38818774 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039817	pseudogene	Chr2:40269660-40273058 (+)
DBA/2J	MGP_DBA2J_G0040010	pseudogene	Chr2:35949938-35952944 (+)
FVB/NJ	MGP_FVBNJ_G0039967	pseudogene	Chr2:35814839-35817867 (+)
LP/J	MGP_LPJ_G0040055	pseudogene	Chr2:37646407-37650632 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039963	pseudogene	Chr2:39856288-39860706 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040896	pseudogene	Chr2:37306149-37309698 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039152	pseudogene	Chr2:37469911-37473189 (+)

Homology

• Gene Tree
  Gm13474
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000084184 (Evidence)
• NCBI Gene
  624652

Representative Sequences			Length	Strain/Species
genomic	624652	NCBI Gene Model | MGI Sequence Detail	2870	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;