Mup-ps21 Pseudogene Detail

Summary

• Symbol
  Mup-ps21
• Name
  major urinary protein, pseudogene 21
• Synonyms
  Gm12555

• Feature Type
  pseudogene
• IDs
  MGI:3652151
  NCBI Gene: 546832
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:61947579-61949899 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 32.97 cM

Strain
Comparison

• SNPs within 2kb
  19 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652151	pseudogene	Chr4:61946633-61949909 (-)
129S1/SvImJ	ENSMUSG00200004741	pseudogene	Chr4:56935301-56937618 (-)
A/J	ENSMUSG00195008669	pseudogene	Chr4:57525456-57527774 (-)
AKR/J	ENSMUSG00220006573	pseudogene	Chr4:57329840-57332158 (-)
BALB/cJ	ENSMUSG00180031898	pseudogene	Chr4:56478482-56480800 (-)
C3H/HeJ	ENSMUSG00175023171	pseudogene	Chr4:57275806-57278124 (-)
C57BL/6NJ	ENSMUSG00215031442	pseudogene	Chr4:57342600-57344920 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037334	pseudogene	Chr4:56067373-56069779 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210006638	pseudogene	Chr4:57011962-57014280 (-)
DBA/2J	ENSMUSG00185019473	pseudogene	Chr4:57399732-57402050 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230005146	pseudogene	Chr4:60916357-60918675 (-)
NOD/ShiLtJ	ENSMUSG00190043049	pseudogene	Chr4:56429341-56431659 (-)
NZO/HlLtJ	ENSMUSG00225013678	pseudogene	Chr4:65944602-65946920 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005023104	pseudogene	Chr4:56704886-56713049 (-)

Homology

• Gene Tree
  Mup-ps21
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Mup-ps21
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000083524 (Evidence)
• NCBI Gene
  546832

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083524	Ensembl Gene Model | MGI Sequence Detail	2321	C57BL/6J
transcript	ENSMUST00000119998	Ensembl | MGI Sequence Detail	448	Not Applicable

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:130465 Chamero P, et al., Identification of protein pheromones that promote aggressive behaviour. Nature. 2007 Dec 6;450(7171):899-902
• Latest
  J:334590 Greve S, et al., The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research. Sci Rep. 2022 Aug 1;12(1):13161