Gm11581 Pseudogene Detail

Summary

• Symbol
  Gm11581
• Name
  predicted gene 11581

• Feature Type
  pseudogene
• IDs
  MGI:3652083
  NCBI Gene: 667555
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:60848275-60849101 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 30.55 cM

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652083	pseudogene	Chr1:60848080-60849596 (+)
129S1/SvImJ	ENSMUSG00200019126	pseudogene	Chr1:58348044-58348870 (+)
A/J	ENSMUSG00195030790	pseudogene	Chr1:57887366-57888192 (+)
AKR/J	ENSMUSG00220042136	pseudogene	Chr1:57979163-57979989 (+)
BALB/cJ	ENSMUSG00180014258	pseudogene	Chr1:58117868-58118694 (+)
C3H/HeJ	ENSMUSG00175001274	pseudogene	Chr1:58264702-58265528 (+)
C57BL/6NJ	ENSMUSG00215035942	pseudogene	Chr1:58196604-58197430 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009132	pseudogene	Chr1:54928427-54929277 (+)
CAST/EiJ	ENSTCUG00005014520	pseudogene	Chr1:58029264-58030090 (+)
CBA/J	ENSMUSG00210054203	pseudogene	Chr1:57950382-57951208 (+)
DBA/2J	ENSMUSG00185055713	pseudogene	Chr1:59069439-59070265 (+)
FVB/NJ	ENSMUSG00205026923	pseudogene	Chr1:57902237-57903063 (+)
JF1/MsJ	ENSUMUG00000047652	pseudogene	Chr1:58029413-58030239 (+)
LP/J	ENSMUSG00230029563	pseudogene	Chr1:59069918-59070744 (+)
NOD/ShiLtJ	ENSMUSG00190040350	pseudogene	Chr1:58110358-58111184 (+)
NZO/HlLtJ	ENSMUSG00225001300	pseudogene	Chr1:62287713-62288539 (+)
PWK/PhJ	ENSLUMG00010026299	pseudogene	Chr1:57541996-57542820 (+)
SPRET/EiJ	ENSMSPG00010026348	pseudogene	Chr1:59488917-59489756 (+)
WSB/EiJ	ENSIUOG00005022018	pseudogene	Chr1:57732091-57732917 (+)

Homology

• Gene Tree
  Gm11581
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm11581
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083355 (Evidence)
• NCBI Gene
  667555

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083355	Ensembl Gene Model | MGI Sequence Detail	827	C57BL/6J
transcript	ENSMUST00000122024	Ensembl | MGI Sequence Detail	763	Not Applicable

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm11581:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6946	Chr1:60847091-60847107 (+)	-1,176 bp