Cyp2j15-ps Pseudogene Detail

Summary

• Symbol
  Cyp2j15-ps
• Name
  cytochrome P450, family 2, subfamily j, member 15, pseudogene
• Synonyms
  Gm12658

• Feature Type
  pseudogene
• IDs
  MGI:3652069
  NCBI Gene: 100125600
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:96133797-96162507 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 44.40 cM

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652069	pseudogene	Chr4:96133797-96162508 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040362	pseudogene	Chr4:96345761-96368110 (-)
A/J	MGP_AJ_G0040339	pseudogene	Chr4:92951134-92973683 (-)
AKR/J	MGP_AKRJ_G0040268	pseudogene	Chr4:95217369-95245708 (-)
BALB/cJ	MGP_BALBcJ_G0040340	pseudogene	Chr4:93197480-93234071 (-)
C3H/HeJ	MGP_C3HHeJ_G0039965	pseudogene	Chr4:96002148-96031382 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040944	pseudogene	Chr4:99995853-100026824 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039040	pseudogene	Chr4:93852375-93868739 (-)
CBA/J	MGP_CBAJ_G0039930	pseudogene	Chr4:103044055-103077507 (-)
DBA/2J	MGP_DBA2J_G0040137	pseudogene	Chr4:92741833-92770829 (-)
FVB/NJ	MGP_FVBNJ_G0040092	pseudogene	Chr4:91605104-91633657 (-)
LP/J	MGP_LPJ_G0040183	pseudogene	Chr4:96659403-96684455 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041034	pseudogene	Chr4:95493009-95517506 (-)
PWK/PhJ	MGP_PWKPhJ_G0038732	pseudogene	Chr4:90883095-90904499 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038434	pseudogene	Chr4:92881961-92910627 (-)
WSB/EiJ	MGP_WSBEiJ_G0039282	pseudogene	Chr4:95607436-95625913 (-)

Homology

• Gene Tree
  Cyp2j15-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Cyp2j15-ps
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000084286 (Evidence)
• NCBI Gene
  100125600

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084286	Ensembl Gene Model | MGI Sequence Detail	28711	C57BL/6J
transcript	ENSMUST00000122267	Ensembl | MGI Sequence Detail	686	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;