Gm11877 Pseudogene Detail

Summary

• Symbol
  Gm11877
• Name
  predicted gene 11877

• Feature Type
  pseudogene
• IDs
  MGI:3652029
  NCBI Gene: 623122
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:19298333-19299184 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 7.43 cM

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652029	pseudogene	Chr4:19298260-19299383 (+)
129S1/SvImJ	ENSMUSG00200001350	pseudogene	Chr4:15976672-15977523 (+)
A/J	ENSMUSG00195017473	pseudogene	Chr4:16449663-16450514 (+)
AKR/J	ENSMUSG00220001411	pseudogene	Chr4:16203776-16204627 (+)
BALB/cJ	ENSMUSG00180002015	pseudogene	Chr4:15927230-15928081 (+)
C3H/HeJ	ENSMUSG00175018779	pseudogene	Chr4:16411978-16412829 (+)
C57BL/6NJ	ENSMUSG00215011404	pseudogene	Chr4:16066288-16067139 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016680	pseudogene	Chr4:16065158-16066009 (+)
CBA/J	ENSMUSG00210001775	pseudogene	Chr4:16133766-16134617 (+)
DBA/2J	ENSMUSG00185001349	pseudogene	Chr4:16243352-16244204 (+)
FVB/NJ	ENSMUSG00205002029	pseudogene	Chr4:15794373-15795224 (+)
JF1/MsJ	ENSUMUG00000002017	pseudogene	Chr4:16271618-16272465 (+)
LP/J	ENSMUSG00230001536	pseudogene	Chr4:19476044-19476895 (+)
NOD/ShiLtJ	ENSMUSG00190026038	pseudogene	Chr4:16126590-16127441 (+)
NZO/HlLtJ	ENSMUSG00225001976	pseudogene	Chr4:23508316-23509167 (+)
PWK/PhJ	ENSLUMG00010001881	pseudogene	Chr4:15731370-15732224 (+)
SPRET/EiJ	ENSMSPG00010013767	pseudogene	Chr4:16270082-16270940 (+)
WSB/EiJ	ENSIUOG00005008616	pseudogene	Chr4:15858515-15859366 (+)

Homology

• Gene Tree
  Gm11877
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082320 (Evidence)
• NCBI Gene
  623122

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082320	Ensembl Gene Model | MGI Sequence Detail	852	C57BL/6J
transcript	ENSMUST00000118921	Ensembl | MGI Sequence Detail	852	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11877:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36575	Chr4:19298257-19298258 (+)	-75 bp