Gm14427 Pseudogene Detail

Summary

• Symbol
  Gm14427
• Name
  predicted gene 14427

• Feature Type
  pseudogene
• IDs
  MGI:3652026
  NCBI Gene: 667817
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:74716716-74717350 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 44.13 cM

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652026	pseudogene	Chr2:74716669-74717421 (-)
129S1/SvImJ	ENSMUSG00200004462	pseudogene	Chr2:71765464-71766098 (-)
A/J	ENSMUSG00195021336	pseudogene	Chr2:71912211-71912845 (-)
AKR/J	ENSMUSG00220002566	pseudogene	Chr2:71876854-71877488 (-)
BALB/cJ	ENSMUSG00180007059	pseudogene	Chr2:71865877-71866511 (-)
C3H/HeJ	ENSMUSG00175011412	pseudogene	Chr2:71991792-71992426 (-)
C57BL/6NJ	ENSMUSG00215030687	pseudogene	Chr2:71828704-71829338 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010485	pseudogene	Chr2:69695740-69696375 (-)
CAST/EiJ	ENSTCUG00005032172	pseudogene	Chr2:71312900-71313537 (-)
CBA/J	ENSMUSG00210002672	pseudogene	Chr2:72034453-72035087 (-)
DBA/2J	ENSMUSG00185011764	pseudogene	Chr2:71870296-71870930 (-)
FVB/NJ	ENSMUSG00205019906	pseudogene	Chr2:71322240-71322874 (-)
JF1/MsJ	ENSUMUG00000042510	pseudogene	Chr2:71547106-71547740 (-)
LP/J	ENSMUSG00230026963	pseudogene	Chr2:73665069-73665703 (-)
NOD/ShiLtJ	ENSMUSG00190011436	pseudogene	Chr2:71944926-71945560 (-)
NZO/HlLtJ	ENSMUSG00225015630	pseudogene	Chr2:81429132-81429766 (-)
PWK/PhJ	ENSLUMG00010033154	pseudogene	Chr2:71785703-71786335 (-)
SPRET/EiJ	ENSMSPG00010023607	pseudogene	Chr2:73182875-73183511 (-)
WSB/EiJ	ENSIUOG00005011969	pseudogene	Chr2:71988213-71988847 (-)

Homology

• Gene Tree
  Gm14427
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Radiation induced
  1
• Targeted
  3
• Genomic Mutations
  5 involving Gm14427
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083837 (Evidence)
• NCBI Gene
  667817

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083837	Ensembl Gene Model | MGI Sequence Detail	635	C57BL/6J
transcript	ENSMUST00000117183	Ensembl | MGI Sequence Detail	635	Not Applicable

References

• Summaries
  All 21

  Phenotypes 15
• Earliest
  J:10491 Davisson MT, et al., The mouse mutation ulnaless on chromosome 2. J Hered. 1990 Mar-Apr;81(2):151-3
• Latest
  J:308920 Bolt CC, et al., Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations. Nat Commun. 2021 Aug 18;12(1):5013

TSS for Gm14427:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr536	Chr2:74717372-74717373 (-)	-23 bp