Gm11410 Pseudogene Detail

Summary

• Symbol
  Gm11410
• Name
  predicted gene 11410

• Feature Type
  pseudogene
• IDs
  MGI:3652015
  NCBI Gene: 100503011
• Alliance
  genome feature page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr4:79922226-79923368 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 37.89 cM

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652015	pseudogene	Chr4:79922226-79923368 (+)
129S1/SvImJ	ENSMUSG00200000953	pseudogene	Chr4:74851426-74852566 (+)
A/J	ENSMUSG00195006060	pseudogene	Chr4:75431026-75432168 (+)
AKR/J	ENSMUSG00220007972	pseudogene	Chr4:74826241-74827378 (+)
BALB/cJ	ENSMUSG00180008376	pseudogene	Chr4:74390835-74391977 (+)
C3H/HeJ	ENSMUSG00175004154	pseudogene	Chr4:75326007-75327149 (+)
C57BL/6NJ	ENSMUSG00215002359	pseudogene	Chr4:75278935-75280076 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000996	pseudogene	Chr4:74895055-74896196 (+)
CBA/J	ENSMUSG00210001237	pseudogene	Chr4:74906061-74907204 (+)
DBA/2J	ENSMUSG00185000749	pseudogene	Chr4:75491669-75492811 (+)
FVB/NJ	ENSMUSG00205001385	pseudogene	Chr4:73681655-73682797 (+)
JF1/MsJ	ENSUMUG00000031757	pseudogene	Chr4:75912859-75914003 (+)
LP/J	ENSMUSG00230008906	pseudogene	Chr4:78940480-78941622 (+)
NOD/ShiLtJ	ENSMUSG00190000973	pseudogene	Chr4:74350615-74351757 (+)
NZO/HlLtJ	ENSMUSG00225005837	pseudogene	Chr4:84010746-84011888 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005010108	pseudogene	Chr4:74708204-74709346 (+)

Homology

• Gene Tree
  Gm11410
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm11410
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000083219 (Evidence)
• NCBI Gene
  100503011

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083219	Ensembl Gene Model | MGI Sequence Detail	1143	C57BL/6J
transcript	ENSMUST00000120053	Ensembl | MGI Sequence Detail	1143	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11410:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37659	Chr4:79921401-79921409 (+)	-821 bp
Tssr37660	Chr4:79921663-79921697 (+)	-546 bp
Tssr37661	Chr4:79921706-79921736 (+)	-505 bp
Tssr37662	Chr4:79922227-79922229 (+)	2 bp
Tssr37663	Chr4:79922690-79922719 (+)	479 bp
Tssr37664	Chr4:79922748-79922756 (+)	526 bp