Gm13641 Pseudogene Detail

Summary

• Symbol
  Gm13641
• Name
  predicted gene 13641

• Feature Type
  pseudogene
• IDs
  MGI:3651867
  NCBI Gene: 115489459
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:71150127-71150599 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 42.38 cM

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651867	pseudogene	Chr2:71150127-71150644 (+)
129S1/SvImJ	ENSMUSG00200036953	pseudogene	Chr2:68209477-68209949 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	ENSMUSG00180042963	pseudogene	Chr2:68308984-68309456 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215033216	pseudogene	Chr2:68247240-68247712 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009598	pseudogene	Chr2:67728735-67729211 (+)
CBA/J	ENSMUSG00210039569	pseudogene	Chr2:68468227-68468699 (+)
DBA/2J	ENSMUSG00185041193	pseudogene	Chr2:68303875-68304347 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230022857	pseudogene	Chr2:70109189-70109661 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225015337	pseudogene	Chr2:77851490-77851962 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005020384	pseudogene	Chr2:68432864-68433336 (+)

Homology

• Gene Tree
  Gm13641
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13641
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000082190 (Evidence)
• NCBI Gene
  115489459

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082190	Ensembl Gene Model | MGI Sequence Detail	473	C57BL/6J
transcript	ENSMUST00000117993	Ensembl | MGI Sequence Detail	473	Not Applicable

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13641:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr18252	Chr2:71150074-71150087 (+)	-46 bp