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H2ac5-ps Pseudogene Detail
Summary
  • Symbol
    H2ac5-ps
  • Name
    H2A clustered histone 5, pseudogene
  • Synonyms
    Gm11336
Location &
Maps
more
  • Sequence Map
    Chr13:23930149-23930482 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 9.90 cM
Strain
Comparison
more
  • SNPs within 2kb
    203 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651860
 pseudogene Chr13:23930088-23930497 (-)
129S1/SvImJ ENSMUSG00200030804
 pseudogene Chr13:21060780-21061113 (-)
A/J ENSMUSG00195041472
 pseudogene Chr13:20209961-20210294 (-)
AKR/J ENSMUSG00220034402
 pseudogene Chr13:20031114-20031447 (-)
BALB/cJ ENSMUSG00180023366
 pseudogene Chr13:20528482-20528815 (-)
C3H/HeJ ENSMUSG00175035821
 pseudogene Chr13:20534693-20535026 (-)
C57BL/6NJ ENSMUSG00215012638
 pseudogene Chr13:20687378-20687711 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037136
 pseudogene Chr13:19573826-19574119 (-)
CAST/EiJ ENSTCUG00005011343
 pseudogene Chr13:20707689-20708022 (-)
CBA/J ENSMUSG00210026848
 pseudogene Chr13:20489987-20490320 (-)
DBA/2J ENSMUSG00185020726
 pseudogene Chr13:21311979-21312312 (-)
FVB/NJ ENSMUSG00205030603
 pseudogene Chr13:20330391-20330724 (-)
JF1/MsJ ENSUMUG00000017311
 pseudogene Chr13:20975939-20976272 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190040798
 pseudogene Chr13:20306528-20306861 (-)
NZO/HlLtJ ENSMUSG00225045587
 pseudogene Chr13:24424402-24424735 (-)
PWK/PhJ ENSLUMG00010034251
 pseudogene Chr13:19867019-19867373 (-)
SPRET/EiJ ENSMSPG00010021578
 pseudogene Chr13:19644009-19644400 (-)
WSB/EiJ ENSIUOG00005037901
 pseudogene Chr13:19831806-19832139 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080999 Ensembl Gene Model | MGI Sequence Detail 334 C57BL/6J ±  kb
transcript ENSMUST00000118168 Ensembl | MGI Sequence Detail 334 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:6330719
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory