Gm11370 Pseudogene Detail

Summary

• Symbol
  Gm11370
• Name
  predicted gene 11370

• Feature Type
  pseudogene
• IDs
  MGI:3651832
  NCBI Gene: 666443
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:30915760-30916019 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.28 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651832	pseudogene	Chr13:30915760-30916019 (+)
129S1/SvImJ	ENSMUSG00200031502	pseudogene	Chr13:28070933-28071192 (+)
A/J	ENSMUSG00195038796	pseudogene	Chr13:27225712-27225971 (+)
AKR/J	ENSMUSG00220013188	pseudogene	Chr13:27080821-27081080 (+)
BALB/cJ	ENSMUSG00180022834	pseudogene	Chr13:27525841-27526100 (+)
C3H/HeJ	ENSMUSG00175035947	pseudogene	Chr13:27548248-27548507 (+)
C57BL/6NJ	ENSMUSG00215012894	pseudogene	Chr13:27691160-27691419 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009855	pseudogene	Chr13:26273348-26273605 (+)
CAST/EiJ	ENSTCUG00005010568	pseudogene	Chr13:27683644-27683903 (+)
CBA/J	ENSMUSG00210028226	pseudogene	Chr13:27491921-27492180 (+)
DBA/2J	ENSMUSG00185021656	pseudogene	Chr13:28310974-28311233 (+)
FVB/NJ	ENSMUSG00205030122	pseudogene	Chr13:27315630-27315889 (+)
JF1/MsJ	ENSUMUG00000022640	pseudogene	Chr13:27936944-27937203 (+)
LP/J	ENSMUSG00230021699	pseudogene	Chr13:37635620-37635879 (+)
NOD/ShiLtJ	ENSMUSG00190037765	pseudogene	Chr13:27685750-27686009 (+)
NZO/HlLtJ	ENSMUSG00225035699	pseudogene	Chr13:31418451-31418710 (+)
PWK/PhJ	ENSLUMG00010032137	pseudogene	Chr13:26751939-26752198 (+)
SPRET/EiJ	ENSMSPG00010024735	pseudogene	Chr13:26811387-26811646 (+)
WSB/EiJ	ENSIUOG00005016649	pseudogene	Chr13:26887296-26887555 (+)

Homology

• Gene Tree
  Gm11370
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11370
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081905 (Evidence)
• NCBI Gene
  666443

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081905	Ensembl Gene Model | MGI Sequence Detail	260	C57BL/6J
transcript	ENSMUST00000120583	Ensembl | MGI Sequence Detail	260	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm11370:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119092	Chr13:30915732-30915740 (+)	-24 bp