Gm11878 Pseudogene Detail

Summary

• Symbol
  Gm11878
• Name
  predicted gene 11878

• Feature Type
  pseudogene
• IDs
  MGI:3651784
  NCBI Gene: 664911
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:22519628-22520027 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 9.73 cM

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651784	pseudogene	Chr4:22519613-22520097 (+)
129S1/SvImJ	ENSMUSG00200001216	pseudogene	Chr4:19217404-19217803 (+)
A/J	ENSMUSG00195017878	pseudogene	Chr4:19697090-19697489 (+)
AKR/J	ENSMUSG00220001368	pseudogene	Chr4:19431928-19432327 (+)
BALB/cJ	ENSMUSG00180001957	pseudogene	Chr4:19174577-19174976 (+)
C3H/HeJ	ENSMUSG00175018337	pseudogene	Chr4:19674800-19675199 (+)
C57BL/6NJ	ENSMUSG00215011164	pseudogene	Chr4:19299039-19299438 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010253	pseudogene	Chr18:31905629-31906030 (+)
CAST/EiJ	ENSTCUG00005016577	pseudogene	Chr4:19281776-19282174 (+)
CBA/J	ENSMUSG00210001714	pseudogene	Chr4:19383992-19384388 (+)
DBA/2J	ENSMUSG00185001381	pseudogene	Chr4:19490508-19490907 (+)
FVB/NJ	ENSMUSG00205001979	pseudogene	Chr4:19009504-19009903 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230000619	pseudogene	Chr4:22757424-22757822 (+)
NOD/ShiLtJ	ENSMUSG00190025506	pseudogene	Chr4:19401563-19401962 (+)
NZO/HlLtJ	ENSMUSG00225001941	pseudogene	Chr4:26713331-26713729 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010013654	pseudogene	Chr4:19501973-19502371 (+)
SPRET/EiJ	ENSMSPG00010022329	pseudogene	Chr13:15437050-15437451 (+)
SPRET/EiJ	ENSMSPG00010003624	pseudogene	Chr19:52794743-52795144 (-)
WSB/EiJ	ENSIUOG00005008551	pseudogene	Chr4:19125168-19125566 (+)

Homology

• Gene Tree
  Gm11878
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000081810 (Evidence)
• NCBI Gene
  664911

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081810	Ensembl Gene Model | MGI Sequence Detail	400	C57BL/6J
transcript	ENSMUST00000117908	Ensembl | MGI Sequence Detail	400	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11878:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36633	Chr4:22519588-22519601 (+)	-33 bp