Gm12991 Pseudogene Detail

Summary

• Symbol
  Gm12991
• Name
  predicted gene 12991

• Feature Type
  pseudogene
• IDs
  MGI:3651750
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:135104469-135104546 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 67.49 cM

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651750	pseudogene	Chr4:135104469-135104546 (+)
129S1/SvImJ	ENSMUSG00200021163	pseudogene	Chr4:128530956-128531033 (+)
A/J	ENSMUSG00195046063	pseudogene	Chr4:129883387-129883464 (+)
AKR/J	ENSMUSG00220048373	pseudogene	Chr4:128877594-128877671 (+)
BALB/cJ	ENSMUSG00180049716	pseudogene	Chr4:127515701-127515778 (+)
C3H/HeJ	ENSMUSG00175048261	pseudogene	Chr4:128536903-128536980 (+)
C57BL/6NJ	ENSMUSG00215052488	pseudogene	Chr4:130043740-130043817 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011455	pseudogene	Chr4:125048132-125048209 (+)
CAST/EiJ	ENSTCUG00005049228	pseudogene	Chr4:129447524-129447601 (+)
CBA/J	ENSMUSG00210053994	pseudogene	Chr4:128160868-128160945 (+)
DBA/2J	ENSMUSG00185053245	pseudogene	Chr4:129689098-129689175 (+)
FVB/NJ	ENSMUSG00205047656	pseudogene	Chr4:127932430-127932507 (+)
JF1/MsJ	ENSUMUG00000045996	pseudogene	Chr4:130374334-130374411 (+)
LP/J	ENSMUSG00230040339	pseudogene	Chr4:133469282-133469359 (+)
NOD/ShiLtJ	ENSMUSG00190050312	pseudogene	Chr4:127921340-127921417 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010050643	pseudogene	Chr4:127366919-127366996 (+)
SPRET/EiJ	ENSMSPG00010045614	pseudogene	Chr4:129435562-129435639 (+)
WSB/EiJ	ENSIUOG00005046245	pseudogene	Chr4:127823273-127823350 (+)

Homology

• Gene Tree
  Gm12991
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm12991
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084032 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084032	Ensembl Gene Model | MGI Sequence Detail	78	C57BL/6J
transcript	ENSMUST00000120561	Ensembl | MGI Sequence Detail	78	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12991:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr39613	Chr4:135104423-135104448 (+)	-33 bp