Gm13141 Pseudogene Detail

Summary

• Symbol
  Gm13141
• Name
  predicted gene 13141

• Feature Type
  pseudogene
• IDs
  MGI:3651744
  NCBI Gene: 115489951
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:147612176-147612631 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 78.51 cM

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651744	pseudogene	Chr4:147612118-147612765 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195035768	pseudogene	Chr4:140305996-140306451 (-)
AKR/J	ENSMUSG00220049273	pseudogene	Chr4:138679330-138679786 (-)
AKR/J	ENSMUSG00220049284	pseudogene	Chr4:139881663-139882119 (-)
BALB/cJ	ENSMUSG00180048043	pseudogene	Chr4:137986490-137986945 (-)
C3H/HeJ	ENSMUSG00175019639	pseudogene	Chr4:150790391-150790846 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013879	pseudogene	Chr4:141146741-141147196 (-)
CAST/EiJ	ENSTCUG00005014546	pseudogene	Chr4:143175931-143176385 (-)
CBA/J	ENSMUSG00210029778	pseudogene	Chr4:139249213-139249668 (-)
DBA/2J	ENSMUSG00185052621	pseudogene	Chr4:142592750-142593205 (+)
DBA/2J	ENSMUSG00185052367	pseudogene	Chr4:141500077-141500532 (-)
FVB/NJ	ENSMUSG00205042893	pseudogene	Chr4:138383072-138383527 (-)
JF1/MsJ	ENSUMUG00000008028	pseudogene	Chr4:142795189-142795644 (-)
LP/J	ENSMUSG00230019245	pseudogene	Chr4:143866078-143866533 (-)
LP/J	ENSMUSG00230018265	pseudogene	Chr4:144937219-144937674 (+)
LP/J	ENSMUSG00230019777	pseudogene	Chr4:149482592-149483046 (-)
NOD/ShiLtJ	ENSMUSG00190035003	pseudogene	Chr4:139009732-139010187 (+)
NZO/HlLtJ	ENSMUSG00225011251	pseudogene	Chr4:151354784-151355238 (-)
NZO/HlLtJ	ENSMUSG00225010899	pseudogene	Chr4:151122198-151122653 (-)
PWK/PhJ	ENSLUMG00010048719	pseudogene	Chr4:138936523-138936977 (-)
PWK/PhJ	ENSLUMG00010048326	pseudogene	Chr4:138704426-138704881 (-)
SPRET/EiJ	ENSMSPG00010037175	pseudogene	Chr4:140822037-140822492 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13141
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  2 involving Gm13141
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000082599 (Evidence)
• NCBI Gene
  115489951

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082599	Ensembl Gene Model | MGI Sequence Detail	456	C57BL/6J
transcript	ENSMUST00000117417	Ensembl | MGI Sequence Detail	456	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:291191 Wolf G, et al., KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage. Elife. 2020 Jun 1;9:e56337
• Latest
  J:299274 Bertozzi TM, et al., KRAB zinc finger protein diversification drives mammalian interindividual methylation variability. Proc Natl Acad Sci U S A. 2020 Dec 8;117(49):31290-31300