Gm11927 Pseudogene Detail

Summary

• Symbol
  Gm11927
• Name
  predicted gene 11927

• Feature Type
  pseudogene
• IDs
  MGI:3651638
  NCBI Gene: 665218
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:32051738-32052914 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 13.94 cM

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651638	pseudogene	Chr4:32051713-32052989 (+)
129S1/SvImJ	ENSMUSG00200012931	pseudogene	Chr4:28745012-28746192 (+)
A/J	ENSMUSG00195000234	pseudogene	Chr4:29264260-29265443 (+)
AKR/J	ENSMUSG00220014655	pseudogene	Chr4:29056597-29057777 (+)
BALB/cJ	ENSMUSG00180000309	pseudogene	Chr4:28767411-28768592 (+)
C3H/HeJ	ENSMUSG00175002445	pseudogene	Chr4:29229344-29230527 (+)
C57BL/6NJ	ENSMUSG00215001002	pseudogene	Chr4:28850250-28851426 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011210	pseudogene	Chr4:26501268-26501981 (+)
CAST/EiJ	ENSTCUG00005000354	pseudogene	Chr4:28709860-28711039 (+)
CBA/J	ENSMUSG00210004765	pseudogene	Chr4:28954035-28955212 (+)
DBA/2J	ENSMUSG00185000368	pseudogene	Chr4:29026456-29027637 (+)
FVB/NJ	ENSMUSG00205000550	pseudogene	Chr4:28611581-28612764 (+)
JF1/MsJ	ENSUMUG00000002581	pseudogene	Chr4:29071287-29072463 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190000594	pseudogene	Chr4:28950837-28952017 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010007665	pseudogene	Chr4:28519580-28520760 (+)
SPRET/EiJ	ENSMSPG00010002485	pseudogene	Chr4:29344732-29345517 (+)
WSB/EiJ	ENSIUOG00005005223	pseudogene	Chr4:28754871-28756052 (+)

Homology

• Gene Tree
  Gm11927
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm11927
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000082398 (Evidence)
• NCBI Gene
  665218

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082398	Ensembl Gene Model | MGI Sequence Detail	1177	C57BL/6J
transcript	ENSMUST00000118472	Ensembl | MGI Sequence Detail	759	Not Applicable

References

• Summaries
  All 7

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11927:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36662	Chr4:32051710-32051731 (+)	-17 bp