Gm12378 Pseudogene Detail

Summary

• Symbol
  Gm12378
• Name
  predicted gene 12378

• Feature Type
  pseudogene
• IDs
  MGI:3651610
  NCBI Gene: 277771
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:37970874-37972334 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 19.89 cM

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651610	pseudogene	Chr4:37970675-37972416 (+)
129S1/SvImJ	ENSMUSG00200005868	pseudogene	Chr4:34762010-34763470 (+)
A/J	ENSMUSG00195003563	pseudogene	Chr4:35154335-35155795 (+)
AKR/J	ENSMUSG00220038497	pseudogene	Chr4:34971567-34973027 (+)
BALB/cJ	ENSMUSG00180027925	pseudogene	Chr4:34734197-34735657 (+)
C3H/HeJ	ENSMUSG00175023616	pseudogene	Chr4:35130496-35131956 (+)
C57BL/6NJ	ENSMUSG00215033830	pseudogene	Chr4:34783385-34784845 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012049	pseudogene	Chr6:123958261-123959770 (-)
CAST/EiJ	ENSTCUG00005005054	pseudogene	Chr4:34706274-34707734 (+)
CBA/J	ENSMUSG00210008178	pseudogene	Chr4:34854321-34855781 (+)
DBA/2J	ENSMUSG00185006932	pseudogene	Chr4:34927963-34929423 (+)
FVB/NJ	ENSMUSG00205028843	pseudogene	Chr4:34509373-34510833 (+)
JF1/MsJ	ENSUMUG00000031622	pseudogene	Chr4:34928230-34929688 (+)
LP/J	ENSMUSG00230001081	pseudogene	Chr4:38254385-38255845 (+)
NOD/ShiLtJ	ENSMUSG00190006181	pseudogene	Chr4:33953898-33955358 (-)
NZO/HlLtJ	ENSMUSG00225007226	pseudogene	Chr4:42184894-42186354 (+)
PWK/PhJ	ENSLUMG00010006960	pseudogene	Chr4:34384247-34385705 (+)
SPRET/EiJ	ENSMSPG00010025267	pseudogene	Chr4:35316646-35318061 (+)
WSB/EiJ	ENSIUOG00005050164	pseudogene	Chr4:34733202-34734662 (+)

Homology

• Gene Tree
  Gm12378
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12378
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000080057 (Evidence)
• NCBI Gene
  277771

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080057	Ensembl Gene Model | MGI Sequence Detail	1461	C57BL/6J
transcript	ENSMUST00000116171	Ensembl | MGI Sequence Detail	1461	Not Applicable

References

• Summaries
  All 7

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12378:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36786	Chr4:37970366-37970399 (+)	-491 bp