Gm13409 Pseudogene Detail

Summary

• Symbol
  Gm13409
• Name
  predicted gene 13409

• Feature Type
  pseudogene
• IDs
  MGI:3651609
  NCBI Gene: 620156
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:24151842-24156350 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 16.30 cM

Strain
Comparison

• SNPs within 2kb
  266 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651609	pseudogene	Chr2:24151669-24157463 (-)
129S1/SvImJ	ENSMUSG00200053413	pseudogene	Chr2:21135756-21140264 (-)
A/J	ENSMUSG00195051352	pseudogene	Chr2:21222239-21226747 (-)
AKR/J	ENSMUSG00220053744	pseudogene	Chr2:21340015-21344523 (-)
BALB/cJ	ENSMUSG00180054408	pseudogene	Chr2:21237097-21241605 (-)
C3H/HeJ	ENSMUSG00175053713	pseudogene	Chr2:21201598-21206106 (-)
C57BL/6NJ	ENSMUSG00215049445	pseudogene	Chr2:21259993-21264501 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053516	pseudogene	Chr2:20959339-20963841 (-)
CBA/J	ENSMUSG00210017727	pseudogene	Chr2:21240552-21245060 (-)
DBA/2J	ENSMUSG00185053907	pseudogene	Chr2:21136534-21141042 (-)
FVB/NJ	ENSMUSG00205050510	pseudogene	Chr2:20988078-20992585 (-)
JF1/MsJ	ENSUMUG00000056071	pseudogene	Chr2:21037420-21043094 (-)
LP/J	ENSMUSG00230046447	pseudogene	Chr2:23071796-23076304 (-)
NOD/ShiLtJ	ENSMUSG00190053573	pseudogene	Chr2:21231874-21236382 (-)
NZO/HlLtJ	ENSMUSG00225011539	pseudogene	Chr2:30822445-30826953 (-)
PWK/PhJ	ENSLUMG00010052955	pseudogene	Chr2:21136136-21140640 (-)
SPRET/EiJ	ENSMSPG00010046258	pseudogene	Chr2:21817333-21822468 (-)
WSB/EiJ	ENSIUOG00005052741	pseudogene	Chr2:21096472-21100980 (-)

Homology

• Gene Tree
  Gm13409
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083172 (Evidence)
• NCBI Gene
  620156

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083172	Ensembl Gene Model | MGI Sequence Detail	4509	C57BL/6J
transcript	ENSMUST00000122072	Ensembl | MGI Sequence Detail	546	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;