Gm13397 Pseudogene Detail

Summary

• Symbol
  Gm13397
• Name
  predicted gene 13397

• Feature Type
  pseudogene
• IDs
  MGI:3651605
  NCBI Gene: 665315
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:26924692-26925569 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 19.19 cM

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651605	pseudogene	Chr2:26924640-26925604 (+)
129S1/SvImJ	ENSMUSG00200053141	pseudogene	Chr2:23884192-23885069 (+)
A/J	ENSMUSG00195051270	pseudogene	Chr2:23986601-23987478 (+)
AKR/J	ENSMUSG00220053634	pseudogene	Chr2:24104397-24105274 (+)
BALB/cJ	ENSMUSG00180054396	pseudogene	Chr2:24005645-24006522 (+)
C3H/HeJ	ENSMUSG00175054040	pseudogene	Chr2:23975019-23975896 (+)
C57BL/6NJ	ENSMUSG00215050376	pseudogene	Chr2:24033777-24034654 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010376	pseudogene	Chr2:22896590-22897454 (+)
CAST/EiJ	ENSTCUG00005053423	pseudogene	Chr2:23723396-23724272 (+)
CBA/J	ENSMUSG00210017765	pseudogene	Chr2:24008664-24009541 (+)
DBA/2J	ENSMUSG00185053761	pseudogene	Chr2:23900684-23901561 (+)
FVB/NJ	ENSMUSG00205051042	pseudogene	Chr2:23753582-23754460 (+)
JF1/MsJ	ENSUMUG00000056004	pseudogene	Chr2:23801666-23802544 (+)
LP/J	ENSMUSG00230045835	pseudogene	Chr2:25820126-25821003 (+)
NOD/ShiLtJ	ENSMUSG00190053477	pseudogene	Chr2:23992981-23993858 (+)
NZO/HlLtJ	ENSMUSG00225011213	pseudogene	Chr2:33577707-33578584 (+)
PWK/PhJ	ENSLUMG00010053110	pseudogene	Chr2:23880438-23881316 (+)
SPRET/EiJ	ENSMSPG00010047169	pseudogene	Chr2:24605564-24606432 (+)
WSB/EiJ	ENSIUOG00005052910	pseudogene	Chr2:23858180-23859057 (+)

Homology

• Gene Tree
  Gm13397
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083335 (Evidence)
• NCBI Gene
  665315

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083335	Ensembl Gene Model | MGI Sequence Detail	878	C57BL/6J
transcript	ENSMUST00000119562	Ensembl | MGI Sequence Detail	878	Not Applicable

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm13397:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16836	Chr2:26924669-26924680 (+)	-17 bp