Gm11295 Pseudogene Detail

Summary

• Symbol
  Gm11295
• Name
  predicted gene 11295

• Feature Type
  pseudogene
• IDs
  MGI:3651595
  NCBI Gene: 665726
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:22466524-22467718 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 8.45 cM

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651595	pseudogene	Chr13:22466511-22467718 (+)
129S1/SvImJ	ENSMUSG00200014168	pseudogene	Chr13:19562038-19563232 (+)
A/J	ENSMUSG00195039783	pseudogene	Chr13:18710028-18711222 (+)
AKR/J	ENSMUSG00220035483	pseudogene	Chr13:18625711-18626905 (+)
BALB/cJ	ENSMUSG00180039160	pseudogene	Chr13:19071304-19072498 (+)
C3H/HeJ	ENSMUSG00175038097	pseudogene	Chr13:19249221-19250415 (+)
C57BL/6NJ	ENSMUSG00215037612	pseudogene	Chr13:19223003-19224197 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014037	pseudogene	Chr13:19274694-19275888 (+)
CBA/J	ENSMUSG00210032151	pseudogene	Chr13:19110754-19111948 (+)
DBA/2J	ENSMUSG00185014340	pseudogene	Chr13:19805157-19806351 (+)
FVB/NJ	ENSMUSG00205052596	pseudogene	Chr13:18954692-18955886 (+)
JF1/MsJ	ENSUMUG00000025010	pseudogene	Chr13:19513716-19514910 (+)
LP/J	ENSMUSG00230035836	pseudogene	Chr13:29209978-29211171 (+)
NOD/ShiLtJ	ENSMUSG00190024522	pseudogene	Chr13:18991299-18992493 (+)
NZO/HlLtJ	ENSMUSG00225046571	pseudogene	Chr13:22987134-22988328 (+)
PWK/PhJ	ENSLUMG00010030948	pseudogene	Chr13:18439126-18440320 (+)
SPRET/EiJ	ENSMSPG00010021626	pseudogene	Chr13:18218394-18219306 (+)
WSB/EiJ	ENSIUOG00005037045	pseudogene	Chr13:18366507-18367701 (+)

Homology

• Gene Tree
  Gm11295
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm11295
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084038 (Evidence)
• NCBI Gene
  665726

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084038	Ensembl Gene Model | MGI Sequence Detail	1195	C57BL/6J
transcript	ENSMUST00000121379	Ensembl | MGI Sequence Detail	803	Not Applicable

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14