Gm12503 Gene Detail

Summary

• Symbol
  Gm12503
• Name
  predicted gene 12503

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3651570
  NCBI Gene: 115489981
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:44092632-44117475 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 23.12 cM

Strain
Comparison

• SNPs within 2kb
  949 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651570	lncRNA gene	Chr4:44087189-44119780 (+)
129S1/SvImJ	ENSMUSG00200005482	lncRNA gene	Chr4:40139782-40156665 (+)
A/J	ENSMUSG00195006732	lncRNA gene	Chr4:40602148-40618830 (+)
AKR/J	ENSMUSG00220037029	lncRNA gene	Chr4:40289046-40305707 (+)
BALB/cJ	ENSMUSG00180026412	lncRNA gene	Chr4:40188886-40205565 (+)
C3H/HeJ	ENSMUSG00175024286	lncRNA gene	Chr4:40333166-40349845 (+)
C57BL/6NJ	ENSMUSG00215033295	lncRNA gene	Chr4:40113322-40130001 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013671	unclassified non-coding RNA gene	Chr4:38163991-38183301 (+)
CAST/EiJ	ENSTCUG00005038920	lncRNA gene	Chr4:40369293-40386092 (+)
CBA/J	ENSMUSG00210008148	lncRNA gene	Chr4:40024976-40041666 (+)
DBA/2J	ENSMUSG00185006600	lncRNA gene	Chr4:40388404-40405094 (+)
FVB/NJ	ENSMUSG00205029368	lncRNA gene	Chr4:39654848-39671540 (+)
JF1/MsJ	ENSUMUG00000037054	lncRNA gene	Chr4:40617591-40634103 (+)
LP/J	ENSMUSG00230043010	lncRNA gene	Chr4:43941136-43957811 (+)
NOD/ShiLtJ	ENSMUSG00190006364	lncRNA gene	Chr4:40247332-40263991 (+)
NZO/HlLtJ	ENSMUSG00225007080	lncRNA gene	Chr4:48530419-48547105 (+)
PWK/PhJ	ENSLUMG00010006892	lncRNA gene	Chr4:39628719-39645226 (+)
SPRET/EiJ	ENSMSPG00010009832	lncRNA gene	Chr4:40549221-40565991 (+)
WSB/EiJ	ENSIUOG00005049951	lncRNA gene	Chr4:39997640-40014333 (+)

Homology

• Gene Tree
  Gm12503
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12503
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  4

• Ensembl
  ENSMUSG00000087326 (Evidence)
• NCBI Gene
  115489981

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087326	Ensembl Gene Model | MGI Sequence Detail	24844	C57BL/6J
transcript	ENSMUST00000146576	Ensembl | MGI Sequence Detail	3127	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm12503:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37020	Chr4:44106536-44106560 (+)	13,916 bp